| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1978 |
|---|
| Symbol | eutD |
|---|
| ID | 4203179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2217018 |
|---|
| End bp | 2218019 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638082847 |
|---|
| Product | phosphotransacetylase |
|---|
| Protein accession | YP_696411 |
|---|
| Protein GI | 110799517 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0280] Phosphotransacetylase |
|---|
| TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTA TGAAACAAAT ATGGGAAAGT GCTAAAAATA ATAGAAAAAA AATAGTACTT
CCAGAAGGTG ATGAAGAGAG AACTCTTGTC GCTTCACAAA GAATAAAAGA AGAAGGACTT
GCTGACGTTT ACTTAGTAGG TTCAGAACAA GTAATAAGAG AAAAAGCTGA AGCTTTAGGC
GTAAATTTAG AGGGAGTAAA CATAGTTGAT CCTGAAACTT CAGATAAATT AGACACTTAT
ATAAACGAAT TTTATGAATT AAGAAAAGCT AAAGGAATGA CAGTTGAAAA AGCTGGGAAA
ATCGTAAGAG ATCCTTTATA CTTCGGAACA ATGATGGTAA AAATGGGTGA TGCAGACGGA
ATGGTATCAG GTGCTGTACA CACAACTGGT GACCTTTTAA GACCAGGCCT TCAAATAATA
AAAACTGCTC CAGGAGTATC TGTAGTATCA AGTTTCTTCA TAATGATGGT ACCAGGTTCA
CAATATGGAG AAGGTGGAAT GTTATTATTC TCAGACTGTG CTGTTAATCC AAATCCAAAT
GCAGACCAAT TAGCTGCTAT AGCTATAGCT ACTGCTGATA CTGCTAAAAA TCTTTGCAAA
ATGGATCCAA AGGTTGCAAT GCTTTCATTC TCAACAATGG GAAGTGCTGA TCATGATTTA
GTAACAAAGG TAAGAGTAGC AACAGAAAAA GCTAAAGAAT TAAGACCAGA TTTAGATATA
GATGGTGAAT TACAATTAGA TGCTGCTATA GTTGGAAAAG TTGCTTCACA AAAAGCTCCA
AATAGTAAAG TAGCAGGAAA TGCTAATGTT TTAGTATTCC CAGATTTACA AGCTGGAAAT
ATAGGATATA AATTAGTTCA AAGATTTGCT AATGCAGAAG CTATTGGACC AGTTTGTCAA
GGTTTCGCTA AACCAATAAA CGACCTTTCA AGAGGATGTA GTTCAGAGGA TATAGTTAAC
GTTGTTGCAA TAACTGCTGT TCAAGCACAA GCAACTAAAT AG
|
|---|
| Protein sequence | MELMKQIWES AKNNRKKIVL PEGDEERTLV ASQRIKEEGL ADVYLVGSEQ VIREKAEALG
VNLEGVNIVD PETSDKLDTY INEFYELRKA KGMTVEKAGK IVRDPLYFGT MMVKMGDADG
MVSGAVHTTG DLLRPGLQII KTAPGVSVVS SFFIMMVPGS QYGEGGMLLF SDCAVNPNPN
ADQLAAIAIA TADTAKNLCK MDPKVAMLSF STMGSADHDL VTKVRVATEK AKELRPDLDI
DGELQLDAAI VGKVASQKAP NSKVAGNANV LVFPDLQAGN IGYKLVQRFA NAEAIGPVCQ
GFAKPINDLS RGCSSEDIVN VVAITAVQAQ ATK
|
|---|
| |