Gene CPF_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1941 
Symbol 
ID4203139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2179306 
End bp2179608 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content26% 
IMG OID638082810 
Productribosomal protein L7Ae family protein 
Protein accessionYP_696374 
Protein GI110799303 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1358] Ribosomal protein HS6-type (S12/L30/L7a) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT TTCTTAATTT TTTAGGACTT ACAAAAAGAG CAGGTAAACT TTTGGAAGGT 
TATAATAAAT GTGAAGAGGA AATGAAAAGA AGTAAAATCT ACTTATTTAT TTTTTCAAAT
AGCATTTCAA ATCGTTCAAA AGATAAATTC GTTAAGTACT GTGAACAGTA TGATATACCA
TACATAGATA ATTTTTCAAA AGAAGAGTTA GGATATAGTA TAGGTAGATG CGAAATCAAT
ATATTAGGAG TAACTGATGA GAATATGGCA GAAAAACTTT TGTCATATTC TAATAATAAT
TAG
 
Protein sequence
MDKFLNFLGL TKRAGKLLEG YNKCEEEMKR SKIYLFIFSN SISNRSKDKF VKYCEQYDIP 
YIDNFSKEEL GYSIGRCEIN ILGVTDENMA EKLLSYSNNN