Gene CPF_1920 details

Gene Information

• Locus tag: CPF_1920
• ID: 4202401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 2156453
• End bp: 2157067
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638082789
• Product: putative DNA polymerase III, epsilon subunit
• Protein accession: YP_696353
• Protein GI: 110800096
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.931749
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAC TTTTTTTTGA TACAGAAACT ACAGGAGTCA AACCTGGAAG CATATGTCAG 
CTTAGTTATA TCCTTGTAGA CACTTCAACT AAACCTCAAA AAACAATAGG TAAAAATATA 
TTCTTTACAG TTGATGAAAT GGAACCAGAA GCTGAAAGAA TCCATGGTTT TTCCTTAGAG 
AAATTATATG AATTAAGTGA AGGAATGTAC TTTGAAGATC TTTATGCTGA TTTCATAAAT 
GACTTCTTAG AAGCAGATTT TATAATAGGT CATAACGTTC AGTTTGATAT TAAATTCTTA 
AAACATGAAT TACTAGGTCT TGGAGAGTTC TTTGAACCTA ACAACGTATT TTGTACTATG 
AAATATTATA AAGATATTTG TAAAATATTA AGACCTACTG GAGATTATAA AAATCCAAAA 
CTTGAAGAAG TAATCAAACA CTTAAATATA ACTGATTCTG AAATAAGTGA AACTGCTAAT 
AAATATTTCC AAGGTAGTGG AAACTATCAC GATGCTAGAT TTGATACAGC AGCAACTTAT 
CTTACTGTTA TAAATGGTAT AAAAAAAGGA TTAATTCCAA GAAATTATTT TACAAAACTT 
TTAGAAGCAA AATAA 

 

Protein sequence

MKLLFFDTET TGVKPGSICQ LSYILVDTST KPQKTIGKNI FFTVDEMEPE AERIHGFSLE 
KLYELSEGMY FEDLYADFIN DFLEADFIIG HNVQFDIKFL KHELLGLGEF FEPNNVFCTM 
KYYKDICKIL RPTGDYKNPK LEEVIKHLNI TDSEISETAN KYFQGSGNYH DARFDTAATY 
LTVINGIKKG LIPRNYFTKL LEAK