Gene CPF_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1893 
Symbol 
ID4201242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2128868 
End bp2129464 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content26% 
IMG OID638082762 
ProductV-type ATPase, E subunit 
Protein accessionYP_696326 
Protein GI110798597 
COG category[C] Energy production and conversion 
COG ID[COG1390] Archaeal/vacuolar-type H+-ATPase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATT TAAATAATTT AACTTCCAAG ATTCTAAATG ATGCTGAAGA AAAGAAAAAG 
TATATATTAG CTGACGCTGA AGCCCAAAAA GATAAAATAA TATCTAAGAA AACTAATAGA 
GCAGAAGCGG ATAAAGAAGA AATAATAACT AAAGCTAATA TAGAAGCAGA AGTTAAAAAA 
GCAAGAATAA TTTCAAATGC TAAATTATCA GTAAGAAATG ATATGTTAAG AGCTAAGCAA 
GACGTTATAT CAAAAGTATT TAACGAAGCT ATAGAGAAGT TACAAAATCT TTCTAATGGA 
GATTATAAAT ACTATGTTAT CTCAACTTTA GATTCTTTAG AGTTAGAAGG AACAGAAGTT 
ATTATAATCA ATGAAAAAGA TAAAGATATA TTTAGCAATG AGTTCTTGGA AGCATTAAAT 
AAAGAACTTG AATCTAAAGG AAAAAAAGGA AGTATTACAT TAAATATGGA AGGCAAATTT 
AATGGTGGCT TCATATTAGA TAGAAATGGA ATACAAATAA ATAATACCTT TGAAGCTTTA 
ATTAACTCTT TAAGAGGAGA GTTAGAGTTT GAGGTGAACA AAGTATTATT TGATTAA
 
Protein sequence
MSNLNNLTSK ILNDAEEKKK YILADAEAQK DKIISKKTNR AEADKEEIIT KANIEAEVKK 
ARIISNAKLS VRNDMLRAKQ DVISKVFNEA IEKLQNLSNG DYKYYVISTL DSLELEGTEV 
IIINEKDKDI FSNEFLEALN KELESKGKKG SITLNMEGKF NGGFILDRNG IQINNTFEAL 
INSLRGELEF EVNKVLFD