| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1863 |
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| Symbol | |
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| ID | 4202655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2097676 |
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| End bp | 2098650 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082733 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_696297 |
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| Protein GI | 110799789 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00543619 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG AGATTTTTTC TAAAAAAAGA AACTCAAATA AAAATAATTT TTTTAAAATA
TTTTTAGGAG TTTTAGCAAT TATAATATTA TTATGGGGTG GAATAAAAGT TGTTACAATG
ATAGGTAGCA ATTTAGCTAA TAAGGCTTCA ATTAATAAAG AACAGGAAGA GCAGGAGAAG
GTCATAAAGC CTAATCCAGA TGATGTAGTG CCTGGAATGA ATATTACATA TGAAGCAGAT
AAATATGCAG TTGATGCTAA AGATGTACAA GCTATGGCTA ATGACACATA TAAAGGTGAA
GGAAAATATG TATTTTTAAC CTTTGATGAT GGACCATCTA ATTCAACAGA AAAGATATTA
AATATATTAA AAGATAAGGA TGTACATGGA ACATTTTTCG TTTTAGGAAG TAGTATAGAA
AAAGACTCTA AAAGACAAGA ATATTTAAAA GAAGAATTAA AAAGTGGAAA TGCTATTGCA
AACCACAGTT ATAGTCATGA TTTTAAAAAA TTATATCCAG GAAATAAGCT AAAAATTGAT
TCTTTTATGG ATGAGTTTAA TAAGACTAAT GATATAATGC AGAGCATTTT AGGGGGAGAA
TTTGATTGCA AGGTATTAAG AATGCCAGGT GGGTATGGAA CAAGAAAATA TTATAAGGAT
CCTTCTCTTA AAGAATTTGA CGATACATTA CAGGAAAATG GAATAATAAA TGTTGATTGG
AACGCCTTAG ATGGTGATGC AGAGGGAAAA CCATATTCTA CAGAGGAAAT GCTTAATTAT
GTGAAAAAAA CATCAAAAGG AAAAAATCAT GTAGTCATTC TTATGCATGA TGCAGCAGGA
AAAGAAAAAA CTGTAGAAAT ATTACCACAA ATAATAGATT ACTACAAAAA TGAAGGATAT
GACTTTAAAG TTATAAAAAA CACTTCTAAG GAAGAAAATA ATAGCAATAA AACTGAAAAT
AATAAAGATA AATAG
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| Protein sequence | MSKEIFSKKR NSNKNNFFKI FLGVLAIIIL LWGGIKVVTM IGSNLANKAS INKEQEEQEK
VIKPNPDDVV PGMNITYEAD KYAVDAKDVQ AMANDTYKGE GKYVFLTFDD GPSNSTEKIL
NILKDKDVHG TFFVLGSSIE KDSKRQEYLK EELKSGNAIA NHSYSHDFKK LYPGNKLKID
SFMDEFNKTN DIMQSILGGE FDCKVLRMPG GYGTRKYYKD PSLKEFDDTL QENGIINVDW
NALDGDAEGK PYSTEEMLNY VKKTSKGKNH VVILMHDAAG KEKTVEILPQ IIDYYKNEGY
DFKVIKNTSK EENNSNKTEN NKDK
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