Gene CPF_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1846 
Symbol 
ID4203563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2083775 
End bp2084254 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content22% 
IMG OID638082716 
Producthypothetical protein 
Protein accessionYP_696280 
Protein GI110800166 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000154391 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGATT CACTAAAAAA AAGTTATAGA CATTTAAAAA ATATTTTAGG ATTTGTTACT 
GATAAAAGAA ATTATGAAAA TATAAAGAAG CTTTTAAAAA ACTACAAAAT ATTAAGTGAT
ATATCAAATA TAATAGTATC AGTTTTAGTA TTTTTAAGTG GTATTCTTTT AATAATTTCA
GGGATTTATC CTAGTATATT TTATAAGATA AAATTTTTAG ACAATATATA TAGTTTATCT
TTTTTAAGGT TTTCACATAG AGCTTCAGTA TTAATTGGAT TAATGTTAAT AATGACCTCT
AAGGAAGTTT TCTTTAAGGT AAAAAGAGCT TATTATGTTA CATTAACATT GCTTATAGTA
GGAGGAGCCT TTGCCTTTGT AAAAGATTTA GATTACAAAG AAGGAATTTT TATTTTAGGA
GTAATAATAC TTCTAATATT ATCAAAAAAG AGTTTTTACA GAAAAAGTAT TCCCTATTAA
 
Protein sequence
MWDSLKKSYR HLKNILGFVT DKRNYENIKK LLKNYKILSD ISNIIVSVLV FLSGILLIIS 
GIYPSIFYKI KFLDNIYSLS FLRFSHRASV LIGLMLIMTS KEVFFKVKRA YYVTLTLLIV
GGAFAFVKDL DYKEGIFILG VIILLILSKK SFYRKSIPY