| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1840 |
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| Symbol | glgB |
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| ID | 4201895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2076957 |
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| End bp | 2078936 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082710 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_696274 |
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| Protein GI | 110801294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAATT GTAAAGAACT TAAGCATGAG AAAAATGGTA ACGTTACCGA AAAAATAGGA
AAAAACAAAG GAAAAAGCAA AAAAGTGTCT AAAGATGAAA GTTTATTAAG CTTTGATTTG
TTTTTAGAGG GAAAAGAACA TTCAGCTTAT AAGTTTATGG GGGCTCATTT TGTAACTGAA
AATAGAAAAA GGGGTGTAAG ATTTACTACT TGGGCTCCAA GGTCTAGCAA AATATATGTT
ATAGGTGATT TTAATAATTG GGAATTAAAA GAAGAATACT CCATGAAAAA AATTAATGAA
AGAGGAATAT GGAGTTTATT TCTTCCTAAA TTAGAAGAGG GTATAAAGTA TAAATTTGCA
GTAGTAAATG AATGTGGAAA TAATACAGTA TATAAGGCTG ACCCATATGC ATTTAAATCA
GAATTAAGAC CTAATACAGC CTCTGTACTT ACTAAAATTA AGAGTTTTAG ATGGGGAGAT
AAGAGATGGC TTAATAAAAG AGAAAAAGAA GGTTTAGATA ATAAACCTAT GAATATATAT
GAACTTCATT TAGGGTCTTG GAAGAGAAAA GATGGAGAGT TTATGACCTA TGAAGAAATA
AGCGAAGTAC TAGTAGAATA TGTAAAAGAG ATGGGATACA CCCATGTTGA GTTCATGCCT
ATAAATGAAC ATCCCTTAGA TGCTTCTTGG GGATATCAAG GCGTAGGGTA TTACTCAGTT
ACAAGTAGAT ATGGAGATTT AAATGGATTA AAGGCTCTTA TAAATAAACT TCATAAAAAT
AATATTGGAG TATTACTAGA TTGGGTACCT AGCCATTTTT GCAAGGATGA GCATGGATTA
TTTATGTTTG ATGGATCACC AACCTATGAA TATGGAGCTT GGTGGAAGGC TAATAATGAA
GGATGGGGAA CATGTAATTT TGATTTAGGA AGACCAGAGG TTAAATCCTT TTTATTTTCC
AATGCTATGT ACTGGATAAA TGAATTTCAT ATAGATGGAT TAAGAGTAGA TGCGGTTTCT
AATATGCTTT ATTTAGATTA TGGAAGAGAA TATGGAGAAT GGGAACCAAA TATCTATGGA
GGAAATGGAA ACCTTGAAGC TATTGCATTT TTAAAAGAAC TAAATACAAT TATAAAAAAA
GAAGGAAAAG GAGCAATTAC AGTAGCTGAA GAATCAACTT CATGGGAAGG AATTACTAAA
CCGGTTGAAG AGGATGGATT AGGATTTGAT TATAAATGGA ACATGGGATG GATGAATGAT
ACTTTAAGTT ATATTGAGTT AGATCCAATA TACAGAAAGT ATCATCATAA TAAAATGAAT
TTTTCAATGA TGTACAATTA TTCAGAAAAG TTTATTCTAC CAATTTCACA TGATGAGGTT
GTTCATGGCA AGAAATCTCT TATAAATAAA ATGTGGGGAG ATGATTGGAA GAAGTATGCT
GGTCTAAGAC TTTATGCTTC ATTTATGATG GGACACCCAG GGAAAAAATT AATGTTTATG
GGATGTGAAT TTGGTCAGTT CGTTGAATGG AGAGAATGGG AGGAGCTTCA ATGGAATATT
ATTGAAGAAT TTGATATACA CAAAAAAACT CAGGAGTATT TTAAAGCATT AAATCATTTT
TATTTAGAGA ATAGTTCTTT ATGGTCCCTT GATTATGAAG AAGAAGGCTT TAAATGGATT
GATGCTGATA ATTCAGAAGA AAGTGTACTT TCATTTATAA GAATTGGAAA GAATAAAAAG
GAAAAATTAA TATTTATATG TAATTTTACT CCAGAGGTTT ATTATGATTT TAAAGTAGGG
GTTCCAGAAC TTGGAGAATA TGTTGAGGTC TTTAATTCAG ATTCCTTAGA ATTTGGAGGG
GCAGGAAATA TTATGGGAGA TAGTATTTTA AAAGCCACAG AGGAAAGTTT TAAAGATTTT
GATTATTCAA TAATTGTTAA GGTACCTCCA TTAGGAACTT TAGTTTTAAA AGTAAAATAA
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| Protein sequence | MRNCKELKHE KNGNVTEKIG KNKGKSKKVS KDESLLSFDL FLEGKEHSAY KFMGAHFVTE
NRKRGVRFTT WAPRSSKIYV IGDFNNWELK EEYSMKKINE RGIWSLFLPK LEEGIKYKFA
VVNECGNNTV YKADPYAFKS ELRPNTASVL TKIKSFRWGD KRWLNKREKE GLDNKPMNIY
ELHLGSWKRK DGEFMTYEEI SEVLVEYVKE MGYTHVEFMP INEHPLDASW GYQGVGYYSV
TSRYGDLNGL KALINKLHKN NIGVLLDWVP SHFCKDEHGL FMFDGSPTYE YGAWWKANNE
GWGTCNFDLG RPEVKSFLFS NAMYWINEFH IDGLRVDAVS NMLYLDYGRE YGEWEPNIYG
GNGNLEAIAF LKELNTIIKK EGKGAITVAE ESTSWEGITK PVEEDGLGFD YKWNMGWMND
TLSYIELDPI YRKYHHNKMN FSMMYNYSEK FILPISHDEV VHGKKSLINK MWGDDWKKYA
GLRLYASFMM GHPGKKLMFM GCEFGQFVEW REWEELQWNI IEEFDIHKKT QEYFKALNHF
YLENSSLWSL DYEEEGFKWI DADNSEESVL SFIRIGKNKK EKLIFICNFT PEVYYDFKVG
VPELGEYVEV FNSDSLEFGG AGNIMGDSIL KATEESFKDF DYSIIVKVPP LGTLVLKVK
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