Gene CPF_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1836 
Symbol 
ID4202378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2071923 
End bp2072480 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content30% 
IMG OID638082706 
Producthypothetical protein 
Protein accessionYP_696270 
Protein GI110800458 
COG category[S] Function unknown 
COG ID[COG4720] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ACAAACTATC AATTAAAACA ATTGTAGCTA TAGGAATTGG CTCAGCAGTT 
TTTATGATAT TAGGTAGATT TGGTTCTTTG CCTACAGGAA TTCCTAATAC AAACATAGAA 
ACAGCATATG CGTTTTTAGC TTTAATGGCA TTGTTATATG GTCCTTTAGC TGGTTTTTTA 
ATAGGATTCA TAGGACATGC TTTAAAAGAT ATAGTATTCT TTGGATCACC TTGGATAAGT 
TGGGTTTTTG CTTCAGGTAT AGTAGGATTA ATAATTGGAT TTGGAGCTAG ATTTATAAAA 
ATTAATCAAG GAGTATTTAA GTTAAAGCAA ATATTTATGT TTAATTTAAT ACAGATAATT 
GCCAATGGAG TGGCTTGGTT TTTAGTAGCA CCAACTTTAG ATATATTAAT TTACTCTGAA 
CCTGCAAATA AGGTTTATCT ACAAGGGGTA ATTGGTGGAA TTTCTAATAT GGTTACTGTT 
GGAGTTTTAG GAACTATTTT AATAGCTAAT TATGCTAAGA CAAGAATACA AAAAGGTAGC 
TTAAGAAAAG AATATTAG
 
Protein sequence
MKKNKLSIKT IVAIGIGSAV FMILGRFGSL PTGIPNTNIE TAYAFLALMA LLYGPLAGFL 
IGFIGHALKD IVFFGSPWIS WVFASGIVGL IIGFGARFIK INQGVFKLKQ IFMFNLIQII 
ANGVAWFLVA PTLDILIYSE PANKVYLQGV IGGISNMVTV GVLGTILIAN YAKTRIQKGS 
LRKEY