Gene CPF_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1833 
Symbol 
ID4201913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2067992 
End bp2068813 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content27% 
IMG OID638082703 
Productesterase-like protein 
Protein accessionYP_696267 
Protein GI110801312 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.381275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGATA GTCAGAAAGA AGAGAAAAAA TTAAAGAGAA AATTGTTTTT TAAATTCTTT 
AACTACAATT TCTTAAAGGA TAGAAATATA GAATATAAAG AGTTTAGATA TGGTGATAAT
AAAAGAGATT ACTATAGAGT ATATAAAGGC TATGATAAAA GAAAGCCTAC CATATTCTTT
ATATATAGTG GAGGTTTATG GAATGGGAGC CCTAAAGGGT GTGCAGCTAT AGGGAAGTTT
TTCTATAAAT ATGGATTTAC TGTAGTAATT CCATCCTATG AGTTAGCGCC AGAACATAAA
TATCCAGTTC AAATGGAAAA TATATTTTCA GCATTTAAAC ACTATGTAGA AAATAATAAG
CCTAATAGAA TAGTAGTTAT GGGATATTCT TCAGGGGCAG ATTTAGCTGC AAACTTAGTT
TACAATGAAG ACATGAAAGA AAAATTCAAT ATAGATACAA GCATAATATC TTCTTTTATA
ACACTAGGAG GAACCTTAGA TTTTAGCCAA TGTAATTCTA AAGAATATGA AAAGTATATA
AAAAAATATT TATACGGAAA AGAACAGATT TTTGATGTTA ATCCAATAAA TTTACTAAAG
GAAGATTCGC CTAAAATTCC AGTACTGTGC GTTCATGGAG CTAGGGATTC TATAGTAAGT
TATGAAAATT CTAAAAGATT TGTAGAAAAG GTAAATAAAT TTAAAGGAGA TGGACAATTT
TTAAAATTAG AAGGATATCA ACATTTAGAT TTGTTAAATT TATTTATAGG AGTAGGCAAT
GAAAAAACTG GAGATATAAT GAGTTTTATT AATAGATTTT AA
 
Protein sequence
MYDSQKEEKK LKRKLFFKFF NYNFLKDRNI EYKEFRYGDN KRDYYRVYKG YDKRKPTIFF 
IYSGGLWNGS PKGCAAIGKF FYKYGFTVVI PSYELAPEHK YPVQMENIFS AFKHYVENNK
PNRIVVMGYS SGADLAANLV YNEDMKEKFN IDTSIISSFI TLGGTLDFSQ CNSKEYEKYI
KKYLYGKEQI FDVNPINLLK EDSPKIPVLC VHGARDSIVS YENSKRFVEK VNKFKGDGQF
LKLEGYQHLD LLNLFIGVGN EKTGDIMSFI NRF