| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1809 |
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| Symbol | |
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| ID | 4203359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 2042700 |
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| End bp | 2043341 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082679 |
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| Product | putative undecaprenyl diphosphate synthase |
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| Protein accession | YP_696243 |
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| Protein GI | 110800504 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00748094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTC CAAAACATAT AGGGGTTATC CCAGATGGCA ATAGACGTTG GGCTGTAGAA
AATGGACTTG AAAAAGATCA AGGATATTTA CATGGAATTG AACCTGGACT TGAACTTTTT
AAACTTTGTC AAAAACTAGA TATTAAAGAA ATAACTTATT ATGGTTTTAC TACAGACAAT
ACCAAAAGAC CATCATATCA AAAAAAGGCA TTCATAGATG CCTGCATAAA ATCAGTAGAA
TTAATTGCAA ATGAAGATTG TGAATTGCTT GTTATAGGGA ATGCTGATTC TCCAGTTTTT
CCTGAAGAGT TAAAAAAATA TACTAAAAGA ACTACAATGG GCAAAGGTGG CATACGCGTT
AACTTCCTTG TTAACTATGG TTGGGAATGG GATTTAAACC TTCTAAAAGC CTGTGACATT
AAGAGTAAAA ATATCTATGA TAATATTCAA TCAAAGGATA TTTCAAGAAT AGATTTATTA
ATAAGATGGG GCGGTAGACG TAGATTAAGC GGATTTTTGC CAGTTCAATC AGTTTATTCT
GATATATACA TAATTGATGA TTTATGGCCT AATTTTAATA AAGATCATTT CTTTAATGCT
CTTGAATGGT ATAAAGATCA AGATATTACC CTAGGTGGTT AA
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| Protein sequence | MRIPKHIGVI PDGNRRWAVE NGLEKDQGYL HGIEPGLELF KLCQKLDIKE ITYYGFTTDN
TKRPSYQKKA FIDACIKSVE LIANEDCELL VIGNADSPVF PEELKKYTKR TTMGKGGIRV
NFLVNYGWEW DLNLLKACDI KSKNIYDNIQ SKDISRIDLL IRWGGRRRLS GFLPVQSVYS
DIYIIDDLWP NFNKDHFFNA LEWYKDQDIT LGG
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