Gene CPF_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1807 
Symbol 
ID4202824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2039285 
End bp2041300 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content28% 
IMG OID638082677 
Producthypothetical protein 
Protein accessionYP_696241 
Protein GI110799104 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.203389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA AGTACTTTAA AGAGGTTTTA GGAAATAAAA AAACTTTGAA GAATTTGGGG 
ATTAACGTAT TTATTTGGAT TACTCTATCT TTTCTATTAG TATTTTTAGG GGAGTCATTT
CATAGAGGAT CTATTGAAAA TGGAAAGGAT TTTTTAGATA ATCAAACAAC AGTATTTCTA
TTAAACTATC TAATATTTTT GATGATTACT TCAATAGCTT TTTTCTTTAA GAAGACTAGA
ATGGTTTATG GAATAATAAG TACAATTCTT ATGGGCTTTT ATATGGCAAG TGGAGTAATA
CTAGGCTTTA GAGGAACACC ACTTATATGG GCAGATATGT TTTCTTTTAA AGAAGGATTA
GCTATAGCAG GAAATTATTT AAACTTAAAT ATTTTAAAAT ATGCTGTTAT AGCCTTAGTA
ATTATAATTG CAATATTAGT ATTGTTATGG TTTAGTGAAA GATATAAAAG TAGAAATAAA
GTGATTAATC TATATGGCTT TATAATCTTA CCATTATCTA TTTTGGCTGT AGGAGCTTTT
TATGGAAATG CAAAAGGGAG TATAGAAGTA TATAGATGGG ATTTGCCAGT TTCCTATGAG
AGAAATGGGT TTATGTACTC ATTTTTAGAT ACTGCAGCAG GATTTAAGGT TAAAGAGCCA
AGTGATTACA ATAAGGCATC TATTGAGAAA ATAAAGAATG ATATAATTGA AGAAGCACAA
CTAGCTAGTA ATGATACTAA AATGGCATCT GCTATGCCAT CAGAATTTCC TAATATAATA
ATTGTTCAAT TAGAATCATT TATGGATTTA GATAGAATAA ATGGATTAAC TTTTACAGAG
GACCCTATAC CAACCTTTAG AAAAATAGCT AGTGAATCAA CAAATGGCTT TTTAAAGGTA
CCTACTTATG GAGGGGGAAC TGTTAGAAGT GAATTTGAAG TGCTAACTGG ATTAAGTACT
GATTACTTAC CAGTAGGTGA AATACCTAAT AATAATATAC TTAAAAAACA GCCAGTTGAA
AGTTTAGCTT ATATATTACA TGATTATGGG TATGGAACAA ATGTTATACA TAATTACGAA
GGAAATTTTT ATAATAGAGA CACAGTGTAT CCTAACTTAG GATTTGATAA ATATATATCT
ATGGAGTATA TGGACAAACC TACTAATGCT GATTGGCAAT ATCCAGAGGA TGTTTTAAAC
ATAGAACCTA TAGAAGATAT AATATCTAAT AATGAAAAGC CTCAGTTTAT TTATAATGTA
ACTGTAGAAA GTCATGGAGG ATATTCTTCT TCAGATTTTG AAAATTATAC AGTGGATGGA
GATTTAGATC AAGAAGAAAA AAATGAACTT CAATGTTACA TAGATAAATT AAGAGGGGTT
GATGAATACA TAAAAGAACT TTTAGATTAT GTAGAATCTT CAGGAGAGCC TACAGTAATC
GCTATGTTTG GAGATCATCT ACCTTCATTA AAGATAATAA ATGATGATGA GAGTGTATTA
AAAGATGGAA ATAAATATTT AGCTGATTTC TTTATATGGG ATAATATTGG CTTACCAAAG
GAAAATGTAA ATATGGAAGC AGAGGAGTTT ACAACATATA TATTAGAAAA GCTTAATATG
GTGGCAGGAG TTATGCCTAC TTTCCATAAT GCATGTAAGG ATGATGAGAA TTACAAAGAA
GATTTTGAAC TTCTTCAATA TGACATGCTA TTTGGAAATA AATATATCCT AAATGAAAAT
AAAAATAAAT ATGAAAAAAC CAATATGAAG ATGGGATTAA AGGAAATAAC TCTAAATAAT
TATGATATAA AAGATGATAT ATTAACTGTA ACTGGTGATA ATTTTAATTA TAAGAGCAAA
ATTATTATAA ATGGAAAGAT TAAAGAAACT AATTTTATAG ATGAAAATAC ATTAACAACT
ACTGAAATTC CTTCAAATAT TAAAAATATT TCAGTTGGTC AAATAGGAAA GTATGATAAA
ATACTAAGTA GTAGCAATTC ATTAGAAATA AAATAG
 
Protein sequence
MNKKYFKEVL GNKKTLKNLG INVFIWITLS FLLVFLGESF HRGSIENGKD FLDNQTTVFL 
LNYLIFLMIT SIAFFFKKTR MVYGIISTIL MGFYMASGVI LGFRGTPLIW ADMFSFKEGL
AIAGNYLNLN ILKYAVIALV IIIAILVLLW FSERYKSRNK VINLYGFIIL PLSILAVGAF
YGNAKGSIEV YRWDLPVSYE RNGFMYSFLD TAAGFKVKEP SDYNKASIEK IKNDIIEEAQ
LASNDTKMAS AMPSEFPNII IVQLESFMDL DRINGLTFTE DPIPTFRKIA SESTNGFLKV
PTYGGGTVRS EFEVLTGLST DYLPVGEIPN NNILKKQPVE SLAYILHDYG YGTNVIHNYE
GNFYNRDTVY PNLGFDKYIS MEYMDKPTNA DWQYPEDVLN IEPIEDIISN NEKPQFIYNV
TVESHGGYSS SDFENYTVDG DLDQEEKNEL QCYIDKLRGV DEYIKELLDY VESSGEPTVI
AMFGDHLPSL KIINDDESVL KDGNKYLADF FIWDNIGLPK ENVNMEAEEF TTYILEKLNM
VAGVMPTFHN ACKDDENYKE DFELLQYDML FGNKYILNEN KNKYEKTNMK MGLKEITLNN
YDIKDDILTV TGDNFNYKSK IIINGKIKET NFIDENTLTT TEIPSNIKNI SVGQIGKYDK
ILSSSNSLEI K