Gene CPF_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1762 
Symbol 
ID4202659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1984999 
End bp1985466 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content22% 
IMG OID638082634 
Producthypothetical protein 
Protein accessionYP_696198 
Protein GI110799793 
COG category[S] Function unknown 
COG ID[COG3402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00888497 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATA AATTAAGTAA ATTATTTATT GTTAAATCTA TTATTCTTAG ATTTTTAATT 
TTTTCACTTT TATATTTAGG TTTAAGCTTA GGATTTTATA GATTAAAAAG TTTTAGTAGC
TTTAACCAAT TAAATGGAAT TATGGATAAT ACTTTATGGG TTTTACAATT ATTAATTACA
GTTATATTTA TTATATCAGT ATTAATATGT CCAATAATTA AGTATTTTAC GTGGTCTTAT
TTTATATTTA GTGATTTTAT TGAGATTAGA TATGGAGTGT TATTTAAAAG GTATATATGT
ATAAAAAGGA ATAATATAAA ATACATAAAT GTATGCGAAA ATCCAATAGA TATGATTTTA
AGAATAAAGA GCATAAATAT TTATACTGCC GGAGGGAAAG TTAGTATTCC AGCAATTAAT
AAGGAGCAGG TAGAATTTTT CAATTATATA GTTCAGGAGA GAGTTTAG
 
Protein sequence
MKYKLSKLFI VKSIILRFLI FSLLYLGLSL GFYRLKSFSS FNQLNGIMDN TLWVLQLLIT 
VIFIISVLIC PIIKYFTWSY FIFSDFIEIR YGVLFKRYIC IKRNNIKYIN VCENPIDMIL
RIKSINIYTA GGKVSIPAIN KEQVEFFNYI VQERV