Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1762 |
Symbol | |
ID | 4202659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1984999 |
End bp | 1985466 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 638082634 |
Product | hypothetical protein |
Protein accession | YP_696198 |
Protein GI | 110799793 |
COG category | [S] Function unknown |
COG ID | [COG3402] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00888497 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATA AATTAAGTAA ATTATTTATT GTTAAATCTA TTATTCTTAG ATTTTTAATT TTTTCACTTT TATATTTAGG TTTAAGCTTA GGATTTTATA GATTAAAAAG TTTTAGTAGC TTTAACCAAT TAAATGGAAT TATGGATAAT ACTTTATGGG TTTTACAATT ATTAATTACA GTTATATTTA TTATATCAGT ATTAATATGT CCAATAATTA AGTATTTTAC GTGGTCTTAT TTTATATTTA GTGATTTTAT TGAGATTAGA TATGGAGTGT TATTTAAAAG GTATATATGT ATAAAAAGGA ATAATATAAA ATACATAAAT GTATGCGAAA ATCCAATAGA TATGATTTTA AGAATAAAGA GCATAAATAT TTATACTGCC GGAGGGAAAG TTAGTATTCC AGCAATTAAT AAGGAGCAGG TAGAATTTTT CAATTATATA GTTCAGGAGA GAGTTTAG
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Protein sequence | MKYKLSKLFI VKSIILRFLI FSLLYLGLSL GFYRLKSFSS FNQLNGIMDN TLWVLQLLIT VIFIISVLIC PIIKYFTWSY FIFSDFIEIR YGVLFKRYIC IKRNNIKYIN VCENPIDMIL RIKSINIYTA GGKVSIPAIN KEQVEFFNYI VQERV
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