| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1761 |
|---|
| Symbol | |
|---|
| ID | 4201855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1983571 |
|---|
| End bp | 1984989 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 638082633 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_696197 |
|---|
| Protein GI | 110798995 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3428] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0268968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT ATAAAAAAAA TCATTGGTGT AAAATTTTTA TAACCTTTTT TAAGCTTATG
AAAAATACTT GGCCAGTAAT AATATTTTTA GCTTTGAAAT TCAATGATTA TATTGTGGAA
ATAACCTCTA TTTCTATAGT GTTAATTTTA ATTTTTTCTG TGGTGAAATG GTTTAATACA
AGTATTTTAA TTGAAGAAAA TTTTTTAATA TACAGAGAAG GGGCTCTACT TAAGGAAGAA
ATGGTGATTC CCTTAAGGAG CATATCCTTA ATAGAGCTTG AAAGAAATAT AATCTATAGA
ATTTTTAAGC TTAGAAAGAT AAAGATTGAT AGTGTATATC CTTCTTCAAA GAAAAATGCA
GAAATAATAA TGGTATTAAA AAAGAAAGAT TTAGAATCCC TTTATGGAAA CTTAAGTTAT
AGGATGAGGA ATTTAATACA TGATGAAAGA GAAATAAATC AAACCTTAGT CTATAACATA
TCAGCTGTTC ATTTGATTTT ACTTTCAATG CTTAGAAACA ACATATTATT AGGAATAGGG
GTTTTATATT CAAGCATACA TTTTATGAGT AAGATATACA AGGGATTAAA TCAAGAATTA
ATCAGTTTTT TCAAGAATGT TATTGAGGAA AATGTAATAT CTAGAGATAC AATATTAGCA
ATATTTTTAT CAGCACTTTT TTTATTTAGT ATTTTATTAT TAATAGTATT GATATTTTCT
GTCTTAGCAA TATTATCTAA GTATTATAAG TTCACAATAT ATAGGAATAA TAATTATTTA
AAAGTTGAGT ATGGATTAAT AACAAGAAGA AGCTATTCAA TTCCAATGGA AAGCATACAT
GCAGTAAAAA TAGAGCAAAA TATTATAAAT CAAATATTTA AGTTCTATAC TATAAAATGC
TGTGTAGTTG GATATGGAAA TAGTATTAAG GAAGATGAAC TTATATTTCC TTTATGTAAT
GAAAAGGGAT ATAGAGATAT ATTAAAAAAC CTTATTCCTG AGTTTATATT TGAAGGGAAA
GTGTACAGGC CAGAAAAGAA AGATTTAAGA AGATTTTTCA CAATTCCAAT ACAAGTTGCG
CTATATTCTA GTATAGGATT TTTTTTATTA ACTAATGAGA TATGGCCTCT TTTAATAAGC
GTGCCTGTAG TTATTATTGA GAGAACTTTG CTATATAAAA ATACTAAAAT AGGTTTTGGA
AAGGATTTAT ATTATGTTAG CTATAAATCT CTTAATAGAA GACAAATTTT TATAAAAAGA
TCTAGTATGG AAGAAATAAG AGTAACATCA AATCCACTTC AAATAAGAAA AAAGCTTGGT
AATTTTAAGC TAAGATTTTA TTCCCAAAAG AAACTTGATT GGATTAAATT AAAAAACTTA
AAATTAGAGA TTTATGATGA ACTAAAGAAA TGGGCCTAA
|
|---|
| Protein sequence | MNFYKKNHWC KIFITFFKLM KNTWPVIIFL ALKFNDYIVE ITSISIVLIL IFSVVKWFNT
SILIEENFLI YREGALLKEE MVIPLRSISL IELERNIIYR IFKLRKIKID SVYPSSKKNA
EIIMVLKKKD LESLYGNLSY RMRNLIHDER EINQTLVYNI SAVHLILLSM LRNNILLGIG
VLYSSIHFMS KIYKGLNQEL ISFFKNVIEE NVISRDTILA IFLSALFLFS ILLLIVLIFS
VLAILSKYYK FTIYRNNNYL KVEYGLITRR SYSIPMESIH AVKIEQNIIN QIFKFYTIKC
CVVGYGNSIK EDELIFPLCN EKGYRDILKN LIPEFIFEGK VYRPEKKDLR RFFTIPIQVA
LYSSIGFFLL TNEIWPLLIS VPVVIIERTL LYKNTKIGFG KDLYYVSYKS LNRRQIFIKR
SSMEEIRVTS NPLQIRKKLG NFKLRFYSQK KLDWIKLKNL KLEIYDELKK WA
|
|---|
| |