Gene CPF_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1675 
Symbol 
ID4203027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1894448 
End bp1895425 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content35% 
IMG OID638082549 
ProductT4 family peptidase 
Protein accessionYP_696113 
Protein GI110801431 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3191] L-aminopeptidase/D-esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.135147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA TAAAGATTAC AGATATAGAT GGTTTTAAAC TAGGCCACGC TCAAGACTTT 
GAAGGTGCTA CAGGATGTAC AGTATTACTA TGTGAAGAAG GTGCTTCTGG AGGAGTTGAT
GTTCGCGGTG GAGCTCCTGG AACTAGAGAA ACTGATTTAT TAAATCCTAT GGAAATGGTT
GATAAAGTTC ATGCTGTAGT ATTATCTGGT GGCTCTGCCT TTGGACTTGA TTCCTGCTCA
GGGGTTATGG AATATCTAGA AAATAAAAAT GTTGGATTTG ACGTAGGGGT GGCTAAAGTT
CCTATAGTAT GTGGTGCTGT TTTATTTGAC TTAGCCTGTG GTAATCCTAA AGTAAGACCT
AATAAGGAAA TGGGCTTAGA AGCCTGTAAA AATTCTGAAA CCTATCTTGA CTCAAAAAAC
GGAAATATAG GTTGTGGAAC AGGTGCCACA GTAGGTAAAG CCTTAAATCA AAAACTTGCT
ATGAAAGGTG GTTTTGGAAG CTATGCAGTG CAAGTTGGAG ATTTAAAGGT AGGAGCTATT
GTAGGAGTTA ATAGCCTAGG TGATATTGTT GATCCTAATA ATAACAATAA AATAATAGCT
GGTGGATTAA GCCAAGATAG GAATTCCTTT ATAAACATAG AAGAAAGCTT ATTAGCTAAT
TATTCTAATC CTAAAAATGT TTTTAAAGGA AATACTACTA TTGGGTGCAT AGTGACTAAT
GGTGATTTTA ATAAAGCTCA AGCTAATAAA ATTGCATCTA TGGCTCAAAA TGGTTTTGGA
AGAACCATTC GCCCTGCTCA CACTATGTTT GATGGTGATA CAATATTTAC TCTTTCATCA
AATAAAGTTA AGGCAGATAT AAATGTAGTT GGTCTTTTAG CTGCTCAAGT TATGGAGAAA
GCTATTATAA AGGCTGTTAA AGAAGCTGAT TCTTCATATG GATTCTTATC ACATAAAGAT
TTAAAATTTA ATGTATAA
 
Protein sequence
MFKIKITDID GFKLGHAQDF EGATGCTVLL CEEGASGGVD VRGGAPGTRE TDLLNPMEMV 
DKVHAVVLSG GSAFGLDSCS GVMEYLENKN VGFDVGVAKV PIVCGAVLFD LACGNPKVRP
NKEMGLEACK NSETYLDSKN GNIGCGTGAT VGKALNQKLA MKGGFGSYAV QVGDLKVGAI
VGVNSLGDIV DPNNNNKIIA GGLSQDRNSF INIEESLLAN YSNPKNVFKG NTTIGCIVTN
GDFNKAQANK IASMAQNGFG RTIRPAHTMF DGDTIFTLSS NKVKADINVV GLLAAQVMEK
AIIKAVKEAD SSYGFLSHKD LKFNV