| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1658 |
|---|
| Symbol | |
|---|
| ID | 4203421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 1875232 |
|---|
| End bp | 1876383 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638082535 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_696099 |
|---|
| Protein GI | 110798886 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.2932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA AACCAAAAAT ATTATTAGTG ACTTCTTTAT CCCTAATAGT ATTATTAACC
TTATCCATAT ATGTATCCTT AAACAAAAAG AAAACTTCAG CATTTTCAGA AGCCATAAAT
TTATTAAAAG AACCTGACAA AAAAGAAGAT GATGAATTAA AGGGAAAATT TGAAGAAGTA
CTTCAAGACT TATTTAAAAA TAGAAATATA GCCATATTAA ACAATGATTT AGAGGAATTA
AAGAAATTTT ATGATTTAGA AAAAAAGCCT AGTCTTTGGG CCTATGAAAG TGAAAGTAAA
AAAGTTAAGT ATTTAAACAA CTGGTCTCAA AAACAAGGAG TTGTATTTAA TGAAATAAAA
TCAAAAACTG AAATAAGAAA GGCTAGAGAA AGAGAAAAGG ACTTATACGG AATAATATGT
GTTGTTTCAA GTGAATTTAC ATATTATTAT CTTAATGATC CTCTTAAAAC TAATACCTTT
AGATTAGGTA CTTATCACTA TTTAAATTTA AAAGATGAGG GAGATAGGTA TATTATCACT
AAGGAATGGT ACACTGATCC TTTTGCTGAT TCTCTAGATT TAAATAATAT AAAATCTGAT
GAAATTAAAT CCTATATTTT AAATAGTTCT AGTCCATCTT ATTCACCTGA TGAAAGAACA
CAGAAAGCTA TAGATTATGC ACATACCTAT TGTGGAGCAG CTGCAGATGA TGAACTTGGT
TTTAACTATA ATAAAAAATA CACAGACTTT AACCCTCAAG GAGGAGACTG TGCAAACTTC
GCCTCTCAAA TTCTTTTTGA AGGTGGTGGA TTTAAGAAAA ATTCAACATG GAACTATTCT
GATGGTGAAG GTTCTAAGGC TTGGGTAAAT GCTCAAGCAT TTAAAAATTA CATGGTTAAT
AGTGGACGTG CTTCCTATAT TGCTAAGGGT AAATATTCCG AAATATATAA AGCGGCCTAT
AACTTAAGAC CTGGTGATTT TGTAGCTTAT GAAAAAAATG GACGAATAAC TCACATTTCA
ACAGTTACAG GATTAGATAG TAAAGGTTAT CCCCTAGTAA CTTGTCACAA CACAGATAGA
CTTCTTGTTC CTTTTGATTT AGGTTGGAGC AATGACAATA TACGCTTTCA TCTAGTAGAT
GTTTATTATT GA
|
|---|
| Protein sequence | MKRKPKILLV TSLSLIVLLT LSIYVSLNKK KTSAFSEAIN LLKEPDKKED DELKGKFEEV
LQDLFKNRNI AILNNDLEEL KKFYDLEKKP SLWAYESESK KVKYLNNWSQ KQGVVFNEIK
SKTEIRKARE REKDLYGIIC VVSSEFTYYY LNDPLKTNTF RLGTYHYLNL KDEGDRYIIT
KEWYTDPFAD SLDLNNIKSD EIKSYILNSS SPSYSPDERT QKAIDYAHTY CGAAADDELG
FNYNKKYTDF NPQGGDCANF ASQILFEGGG FKKNSTWNYS DGEGSKAWVN AQAFKNYMVN
SGRASYIAKG KYSEIYKAAY NLRPGDFVAY EKNGRITHIS TVTGLDSKGY PLVTCHNTDR
LLVPFDLGWS NDNIRFHLVD VYY
|
|---|
| |