| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1587 |
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| Symbol | |
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| ID | 4201712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1804774 |
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| End bp | 1806513 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082465 |
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| Product | putative phage terminase, large subunit |
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| Protein accession | YP_696030 |
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| Protein GI | 110800668 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0773483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAATA CAGTTCTTGA AGAGCTTATT GATTATTCTA ATAAAATACT AAATTGTGAA
ATTGTTGCTT GTAAAAGACA TAAACAAGCT TGTCAGAGAT TTCTAAATGA TTTAGAAAGA
ATGGAGCATG AAGATTTCGA GTATTATTGG GATGAAGAGG AAGCTCAAAA AATTGTTAAG
TGGTATAGTT ACTGTAAACA TTCAAAAGGA GTATTAGAGG GACAACCAAT AATATTAAAT
TCATGGTCAA AGTTTGTAAT TTGTAATATA GAAGCTTGGA AGCATAAGGA TACAAATTAT
AGAAGGTTTA GATTTGCTTT TATTCAAGTA GGGAGAAAAA ATGCAAAATC TCAAATGGAA
GCTGGAATGG CTGGTTATGA AATAGGAGCA AAAGGGTATA ATGCAGCAGA AGTTTATACT
TTAGGAGTTG AAAGAGATCA GGCTAAAATT GTTTTTGATG AATGGGAGCT AATGACTTCT
AAACCATTAA AGAAGAAATT TAAGTTTACT CAAAAAGAAA TACGACATAG AAATAGTAAT
AGTTTTATGA AGCATTTAAG TAAAAAAGCT GGTAAAACTG GTGATGGTAA GAATCCACAA
ATGGCTATTA TAGATGAGTA TCATGCACAT CCTAATTCAG ATATGTATGA TGTTATGAAA
TCAGGTATGA TGGCAAGAAC AGAGCCATTA TTAGTAATAA TAACTACGGC TGGAATGGAC
TACGAAGAAA CGGCTTGTTA TTATGAATAT TTAGATTGTT GTTCAATATT AGATGGAACT
TTTGAGAATG ATAAATACTT TGTAATGATT TGTGAGCTAG AAAAAGAAGA TGATCCTTTT
GATGAAGAAG TTTGGTTAAA GGCTAATCCA ATTTTATGTA CTTATCCTGA AGGAATACAA
AGCATGAGGG AAAATGCTAA ATTAGCTAAG AATACAAGTA ATGAAAAGAA GAGAATAGAG
TTCTTTACTA AGAATTGTAA TATATATGTT GCAGCAGGAG AAAAAAGGTA TGTTGATGTT
GAATACTGGA AAGCTTGTAA AAAGGAATTA ACCTTAGAGG ATTTCAGAGG ACATGATTGT
TATATTGGAA TAGATTTATC AAAGTCAGGG GATTTAACTT CAATTGCTTT TGAGTTTCCT
TATTTAGATG GGAATATTAG ACGATATGCT TTATTTGGAC AATCATTTAT ACCATCAGAA
GTAGTTAAAG AAAAAATGAT AACTGACAAT GTACCATATG AATTATGGAG TAAAAAAGGT
TGGTTAATAA AGACAGAAGC TAATGATGGT TTAATAGTAG ATTTTTGGGC AGTTCTAAAT
ACTATAGAAA GTATTGTAAA AGAATATGAA CTAAATGTTA TAGAAGTTAG TTATGACCCT
CATGGAGCTG CAATGTTAGT TGGAGAACTA GAAAGAAAGG ATTATACCTG TGTAGAATGT
GGACAAAGTT GTGCAAAACT AAATGAAGCT ACTGTAAATT TTAGAGATTT AATGAAAGTT
AAGCAACTTG AACATGATGA TAATAAACTT ATGACTTGGT GTGTTCAAAA TGCAGAGATT
GATTCCAACT CTTTTGGAGA AATAAAAATA AGTAAAAAAA GCAGATTTAA AAGAATTGAC
CCATTAGCAA GTTGTATATT CGCTCATGTT AGAGCTATAA CATATTGGAA AAGAGAAAAC
TTAAATGTGA GTGAATTTGC AGAAGAAGAT TTCTTAAAGA GATTATGGGG GAGAAAATAG
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| Protein sequence | MYNTVLEELI DYSNKILNCE IVACKRHKQA CQRFLNDLER MEHEDFEYYW DEEEAQKIVK
WYSYCKHSKG VLEGQPIILN SWSKFVICNI EAWKHKDTNY RRFRFAFIQV GRKNAKSQME
AGMAGYEIGA KGYNAAEVYT LGVERDQAKI VFDEWELMTS KPLKKKFKFT QKEIRHRNSN
SFMKHLSKKA GKTGDGKNPQ MAIIDEYHAH PNSDMYDVMK SGMMARTEPL LVIITTAGMD
YEETACYYEY LDCCSILDGT FENDKYFVMI CELEKEDDPF DEEVWLKANP ILCTYPEGIQ
SMRENAKLAK NTSNEKKRIE FFTKNCNIYV AAGEKRYVDV EYWKACKKEL TLEDFRGHDC
YIGIDLSKSG DLTSIAFEFP YLDGNIRRYA LFGQSFIPSE VVKEKMITDN VPYELWSKKG
WLIKTEANDG LIVDFWAVLN TIESIVKEYE LNVIEVSYDP HGAAMLVGEL ERKDYTCVEC
GQSCAKLNEA TVNFRDLMKV KQLEHDDNKL MTWCVQNAEI DSNSFGEIKI SKKSRFKRID
PLASCIFAHV RAITYWKREN LNVSEFAEED FLKRLWGRK
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