| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1545 |
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| Symbol | thiD |
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| ID | 4203560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1763106 |
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| End bp | 1763900 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082423 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_695988 |
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| Protein GI | 110800163 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.104036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAT TATTTAATGC ATTAACAATT GCAGGGTCAG ATAGTTCAGG GGGAGCAGGA
ATACAGGCTG ATATAAAAGC TTTTTCTGCT AATGGAGTTT ACGGAATGAG TATAATAACT
GCCATAACAG CTCAGAATAC TCAAGGAGTT TTTGGAATAA TGGATGTTAC TCCTGAAATC
ATAGAAAAAC AAATAGATGT TATTTTTAAT GATATAGAAG TAGGTGCCAT AAAAATAGGT
ATGGTATCTA AAATTGAATC AATAAAAGCC ATAAGTAATG CTTTAGGAAG AGTAGAAAAA
TTGCCTCAAA TAGTATTAGA TCCTGTTATG ATTTCAAAAA GTGGATTTAA GCTTTTATCA
GATGATGCAA AAAATACTTT AATAGAGAAG TTAATACCTA TATCTACTTT GATAACTCCA
AATTTACCAG AGGCAGAAGA ATTATTAGGC AGAGAAATAC TTACAATAGA AGATATGAAA
AAGGCAGCCT GTGATCTTAA AAAATTAGGA GCAAAAAATG TTTTAATTAA GGGTGGACAT
TTAGAAGGAG AGGCTACAGA TATTTTATAT GATGGTGAAA ACTTTATTCT TTTTAATGAA
GAGAGAATAA ATACAAAGCA TACCCATGGA ACAGGATGTA CCTTATCATC AGCTATTACA
GCTAATTTAT CAAAGGGAAT GAATATAGTT GATTCTGTGA GATGTGGAAA AGAATATATT
ACAGGTGCTA TAAAAAATGG GTTTGAACTT GGAAAGGGTG TTGGACCAAC ACAGCATTTC
TATAAATTTT ACTAG
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| Protein sequence | MSKLFNALTI AGSDSSGGAG IQADIKAFSA NGVYGMSIIT AITAQNTQGV FGIMDVTPEI
IEKQIDVIFN DIEVGAIKIG MVSKIESIKA ISNALGRVEK LPQIVLDPVM ISKSGFKLLS
DDAKNTLIEK LIPISTLITP NLPEAEELLG REILTIEDMK KAACDLKKLG AKNVLIKGGH
LEGEATDILY DGENFILFNE ERINTKHTHG TGCTLSSAIT ANLSKGMNIV DSVRCGKEYI
TGAIKNGFEL GKGVGPTQHF YKFY
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