| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1542 |
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| Symbol | recQ |
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| ID | 4203020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1759672 |
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| End bp | 1761450 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082420 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_695985 |
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| Protein GI | 110801424 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.260757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAG AGTTTGAGGT ATTAAATAAT ATTTTTGGAT ATAGGGACTT TAGAAAAGGG
CAACAGGAGG TAATAGATAA GATTTTAAAT GGAAAGGATG TATTTTGTAT ATTACCTACT
GGAGGAGGAA AATCTTTATG TTATGAAATA CCTGCTTATA TTTTTAAAGG AACAACACTT
GTTATTTCTC CCTTAATATC TCTTATGAAG GATCAAGTTG ATAACTTAAA TTCCTTAGGA
ATTAATGCTG CTTATATAAG TGGAGGAAAT GACTTTGAAG AGGTTAAAAA TATAATTAGG
AAATTCATAA AAGGAGAATT TAAGCTTCTT TATGTATCAC CTGAGAGATT AGAAAATAGA
TATTTTTTAG ATAATATAGA AAAAGCTAAT ATTGCACAAA TTGTAGTTGA TGAAGCTCAC
TGCGTATCAA TGTGGGGCCA TGACTTTAGA AAAAGTTATA GCAAGATAAA ACCATTTATT
TGTAATTTAA AGAAAAGACC AATTATTACA GCCTTTACAG CTACGGCTAC AGAGATAGTT
ATGAAGGATT CCATTGAACT TTTAGGTCTT TATAATCCCT TTATTTATAA GGGTAGCTTT
AGTAGAGATA ATTTGGAGAT AAATGTATTA AAAGAAGTTG ATAAATTAGA AATTATAAGT
GAAATTATAA GTGAACATGA GGAAGAGTCA GGAATAATTT ATTGCTCAAC TAAAAATGAA
GTTGAAGAAC TTTATAAACA TATGCTTTAT AGAGGGAAAA GTGTAGGGAA ATATCATGGA
TCCTTAAAAG ATAAGGAAAA AAATTATTAC CAAGAAGAGT TTTTAAATGA TAATTTTAAG
GTTATGATTG CCACAAATGC TTTTGGTATG GGAATTGATA AGCCTGATGT TAAGTTTATA
ATACATTCAA CATTTCCAAA AAGTATAGAA AATTATTATC AAGAAATAGG CCGTGGAGGA
AGAGATGGAA GCTTAGCTAA GTGTTATCTC CTTTATTCAG AGCAAGATAT AAGGGTTATG
GATTATTTGA TAAGTTCAAC TACAGAAATA TCTAGAAGAA CTATAGAACT TAAAAAACTA
GAAAAAATAA TAGAGTTTTG TAATTATGAT AAGTGTCTTA GAAAATATAT TTTAGATTAT
TTTGGAGAGG AAAATTCCAT AAAGTATTGC AATAATTGTA CTAACTGCTT AAAAAATAGT
GATTTAATAG ATATGACATT AGAGGCACAA AAAATATTAT CATGTATATA TAGAACAAAG
GAAGCCTTTG GAGAAAGTGT TTTAATAGAT ATTTTAAGGG GGATTCATGG GCCAAAGATT
GAAAAATATA AGCTATATGA GCTTTCAACC TTTGGAATAA TGAAAGAATA TACAAGTAAG
TATATAAAGG ACATAATAAA GGAGCTTTTA TCTATTAAGG CTTTAGAGAG AAAAGAAGGA
ACATATTCTA TGCTAAAGTT AAATAGAAAA TCTATAGGAA TATTAAAGGG AGAAGAAAAG
GTACTTTTAG AGGTTAATAA TAATGAAGAA AGCATGTGCA TGGATTTAGA ACTTTTCAAG
AAGCTTCGTA TTTTAAGAAA AGATATATCA AGAAGAGAAG GAGTAAAACC ATACATAGTT
TTTACAGATT CAATGATTAT GGAGATAATA AATAAAAATC CTAAAAGTAA AGAGGATTTA
AAAAATATTA GGGGTTTTGG AGAGCAGAAA ATAACAAAGT ATGGCCCTTT TATTCTTACA
ACTTTAAGAG ATTATGAAAA GTATGGAAAA AGAAATTAG
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| Protein sequence | MRREFEVLNN IFGYRDFRKG QQEVIDKILN GKDVFCILPT GGGKSLCYEI PAYIFKGTTL
VISPLISLMK DQVDNLNSLG INAAYISGGN DFEEVKNIIR KFIKGEFKLL YVSPERLENR
YFLDNIEKAN IAQIVVDEAH CVSMWGHDFR KSYSKIKPFI CNLKKRPIIT AFTATATEIV
MKDSIELLGL YNPFIYKGSF SRDNLEINVL KEVDKLEIIS EIISEHEEES GIIYCSTKNE
VEELYKHMLY RGKSVGKYHG SLKDKEKNYY QEEFLNDNFK VMIATNAFGM GIDKPDVKFI
IHSTFPKSIE NYYQEIGRGG RDGSLAKCYL LYSEQDIRVM DYLISSTTEI SRRTIELKKL
EKIIEFCNYD KCLRKYILDY FGEENSIKYC NNCTNCLKNS DLIDMTLEAQ KILSCIYRTK
EAFGESVLID ILRGIHGPKI EKYKLYELST FGIMKEYTSK YIKDIIKELL SIKALERKEG
TYSMLKLNRK SIGILKGEEK VLLEVNNNEE SMCMDLELFK KLRILRKDIS RREGVKPYIV
FTDSMIMEII NKNPKSKEDL KNIRGFGEQK ITKYGPFILT TLRDYEKYGK RN
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