| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1520 |
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| Symbol | |
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| ID | 4201182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1736160 |
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| End bp | 1737722 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082398 |
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| Product | vanW-like family protein |
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| Protein accession | YP_695963 |
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| Protein GI | 110800526 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.516908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGAAG AAAAGAAGAA ATCAAGCACA GGCTTACTTA AAAGCAAAAA GAAAATAATA
ATATCAATAG TTATTGTATT AGCAATTATA ATAGGTTCTA TTGTTGCATA TATAGTTAGT
ATTCAGAAAA AAGTTGAAGA GTGGAATGAT AAGATATATC CTAACGTATA TGTTGAAAAT
GTAAATTTAT CAGGAATGAC AAAGGAAAAG GCCATTGAGG TTTTAGAGAA GGATGTAAAA
GAACCTGTAG AACATAAAAC TATAAAAGTT CAGGCGGCAG ATAAAAGTAT TGAAATAAAA
TATTCTGATT TATCACCAGA ATATAATATA GATGAAACTG TTAATGAAGC TATGAATTAT
GGAAAAGATT TAAATCTTTT TGAGAAAAAT AACCTTATAA ATGGAAAAGA TAAAAAGGAA
TTAAATTTAG ATTTTAAATA TGATGAATCT AAGTTAACAG ATTATGAGAA AAAACTTACT
GAAATGGTAA ATCAAAATGC TAAAAATGCT ACCATAAGTA TAAATGGTAG TAATATAAGT
GTAATAGAAG GCGAAGATGG AAGAGCCATA GAAGAAGATA AAATGGTTTC TTTAGTAAAA
GAAGCTATAA ATGCAAATCC AGAGGATAAT TCAGTTGTGG AAGTACCTGT AGAGGTTACA
AAACCAAAAA TAACTAAGGA AATGCTTTCA AAAATAGACG GCGTTATAGG AAGTTTTACA
ACAAGTTATA CAAGCTCAGA TGCTAATAGA AGTGCTAATG TTGAAATTGC AGCTAAAACG
GTTAATGGAA CTATTTTAAT GCCAGGAGAT ACATTTAGTT ATAATAATAC TTTAGGGGAA
AGAACCACAG CTAAGGGATA TAGAGATGGA GCGGCTTACG TAGGAAATAA AGTAGTAATG
GTTACTGGTG GAGGAATCTG TCAAGTTTCT ACAACATTAT ACAGAGCTGT TTTAAGAGCT
GGAATAATGC CAACAGAGAG ACATAATCAT AGTATGACAA CTACTTATTC AGGCCCAAGT
GAAGATGCTA CAGTTTCATG GGGATCTTTA GACTATCAAT TTAAAAACCC TTATGATTTC
CCAATATATA TACAAGGATA TACAAGTAAT AAACATGTAA CATTTAATAT ATATGGAAAT
GTACAAGGTA TGGATGGAAA AACTTATGAA TTACAAACTG TAGTAAATGA AACTCTAAAA
CCATCAGTTA AAACAGTTGA TGATCCTAAT TTGCCAGAGG GACAAAAAGT TGTTGAGCAA
AGACCAGTTA CAGGATATAA GTCATCAGGA TATTTAGTAA CTTATCAAAA TGGAAAAGAA
ATAGATAAGA AATTAATAGG ACATGATGTA TATAAACAAA AGGATGAAAT TATAAAGGTT
GGAACAAAAA AAGCTGAGCA ACCAAAGCAA GAAGCACCAA AACAAGAACA GCCAGCTACT
GCAAAGCCAG AGGAGCCAAA ACAAGAGGCA ACTCAGCCAT CAACATCACA ACCTGCTACA
AATCAAGCAC CTGATGCAAC ACCTCAAACA CCTAATGCAG GGCAAACACC ACCAGCGCAG
TAA
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| Protein sequence | MKEEKKKSST GLLKSKKKII ISIVIVLAII IGSIVAYIVS IQKKVEEWND KIYPNVYVEN
VNLSGMTKEK AIEVLEKDVK EPVEHKTIKV QAADKSIEIK YSDLSPEYNI DETVNEAMNY
GKDLNLFEKN NLINGKDKKE LNLDFKYDES KLTDYEKKLT EMVNQNAKNA TISINGSNIS
VIEGEDGRAI EEDKMVSLVK EAINANPEDN SVVEVPVEVT KPKITKEMLS KIDGVIGSFT
TSYTSSDANR SANVEIAAKT VNGTILMPGD TFSYNNTLGE RTTAKGYRDG AAYVGNKVVM
VTGGGICQVS TTLYRAVLRA GIMPTERHNH SMTTTYSGPS EDATVSWGSL DYQFKNPYDF
PIYIQGYTSN KHVTFNIYGN VQGMDGKTYE LQTVVNETLK PSVKTVDDPN LPEGQKVVEQ
RPVTGYKSSG YLVTYQNGKE IDKKLIGHDV YKQKDEIIKV GTKKAEQPKQ EAPKQEQPAT
AKPEEPKQEA TQPSTSQPAT NQAPDATPQT PNAGQTPPAQ
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