| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1485 |
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| Symbol | |
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| ID | 4202565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1683676 |
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| End bp | 1685592 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638082363 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_695928 |
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| Protein GI | 110799062 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AATTACCTAA GGAAGCTTAT GGTGGTGTAA GCGGTAAAGA TTATGTTCCT
TATTTTACTG GTAAGTCAAA AAATGGAGTT AATCTTCCTG TACTAATAAT AGGTATAGTA
TTAGCTATTG TTTTTGCTGC TTCAACTGCT TATTCAGGTA TGAAATCAGG GTTAACTGTT
GCTGCTGGTA TACCTGGAGC TATCATAGGG TCAGTTTTTG TAGGAATATT TGCACGTAGC
AAGGGTATTC TTGGAAAAAA CATAACTCAA GGTATGGCAA GTGGAGGAGA ATCTATAGCA
AGTGGTATGA TATTTGTATT ACCAGCAATT ATACTAATAG GAAGTGACTT TACTTTCTTA
GAGGGTGTAG CTGCAGGTGT AGGAGGAGTT CTATTTGGTA TAGGATGTCT ATCACTAGTT
TATAACTACC TAATAGTTGA GGAACATGGA AAACTTATGT ATCCTGAGTC AATGGCAATA
TCTGAAACTC TTGTTGCTTC TGAAGGAAGT GAAGACTCAA TTAAATTTAT GGGTATTGGA
TTTGTTATAA GTGGTATCAT AAATGTTTTA ACAGGATCAT TTTTAAACTT AATAAACAAT
ACTGTTACAT ATTTAGGAAG CAAATTTTAT AAGTGGAAGT TCTCTACTGA AGTAAACCCA
CTTTTACTTG GTATTGGATT TATAGTTGGA TTAGAAGTAT CACTTACTAT GTTTGCAGGA
TCTATACTAG CTAACTTTGG TATAGCTCCA TTAATAGGAT ATTTCAGTGA TATGGCAGAG
AAGAGCATGC ATTCATGGAA TGACGCTTCA ATGTTAATTC ACCAAATGGA CGTAAATGCA
ATATCAGGAA GTTACGTTAA GTATATAGGA GCAGGAATGA TGCTTTGTGG AGGTATTATA
GGTGCTATAA AACTTATACC AACTATAATA GTTTCAATAA AAGAAACATT AAAAGCAAGC
CCTGTTAATG AAGAAAATGC TGAGAAAAAT AGCGGATCTA TAATAATACT TTTAGTAGGA
GCTGTATTAG CTTTTGTTAT AGGATTCTTT ATTTCTAATA GCATTGCAAT GGCTATAACA
GGAGCAGTTG TTTCAATAAT CCTATCATTA CTATTCGTAA TAGTTGCAGG ACGTTTAACT
GGTACAATAG GAACATCAAA CCTTCCTGTA TCAGGTATGA CAATAGCTTC ATTAGTAATA
TTAACACTAG TATTCGTTAT AATGGGATGG ACTGGAAAAG CTGATAACAA AGCATTACTT
TTATTTGCTA CATTTATGGT TGTTTCAATC TCTGTAGCAG GTGGATATAG CCAATCTCAA
AAGGTAACAT ATATAATTGG TGGAAGCAAA AAAGAAATGC AAAACTCTTT CATGATTGCA
AGTATAGTTG GTGTTGTTGT TGTTACTGGA ACAATATTAG TACTTTCTAG CCAATTATCA
ATAACTGGAG CAGATGCACC TTTTGCATTA CCACAAGCTA ACTTAATGTC AACATTAACT
TCAGGTATAA TGGAAGGAAA CTTACCTTGG CCTATGATAA TTGTTGGAGT AGTTATGGCT
TTATTCTTAT ACTTAGTAGA CTTACCAATA ATGACTGTTG CAATAGGATT CTATTTACCT
ATATCAACAA CTTCTATAAT TTTAGTAGGT GCATTAATAC GTGTATTTAT TGAAAAAATG
AGCAAGAGTG ATCATGAAAA AGAAGTTAAG GTTTCAAATG GAATAAGTTT ATCTTCTGGT
CTTGTTGCTG GAGGATCTAT TGTGGGATTA ATAGGAATAG TTCTACAAGT AACAGGAATA
ATAACACCTG GAACACCAAC TGGTTTTGTA GCTAGCAATG GAATGGCAAT AATAGTGCTT
ATTCTTTTAG TTTTAGCAAC TACATTGCCT ATTATGAAAT CTAAGGTGAA ACATTAA
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| Protein sequence | MKKKLPKEAY GGVSGKDYVP YFTGKSKNGV NLPVLIIGIV LAIVFAASTA YSGMKSGLTV
AAGIPGAIIG SVFVGIFARS KGILGKNITQ GMASGGESIA SGMIFVLPAI ILIGSDFTFL
EGVAAGVGGV LFGIGCLSLV YNYLIVEEHG KLMYPESMAI SETLVASEGS EDSIKFMGIG
FVISGIINVL TGSFLNLINN TVTYLGSKFY KWKFSTEVNP LLLGIGFIVG LEVSLTMFAG
SILANFGIAP LIGYFSDMAE KSMHSWNDAS MLIHQMDVNA ISGSYVKYIG AGMMLCGGII
GAIKLIPTII VSIKETLKAS PVNEENAEKN SGSIIILLVG AVLAFVIGFF ISNSIAMAIT
GAVVSIILSL LFVIVAGRLT GTIGTSNLPV SGMTIASLVI LTLVFVIMGW TGKADNKALL
LFATFMVVSI SVAGGYSQSQ KVTYIIGGSK KEMQNSFMIA SIVGVVVVTG TILVLSSQLS
ITGADAPFAL PQANLMSTLT SGIMEGNLPW PMIIVGVVMA LFLYLVDLPI MTVAIGFYLP
ISTTSIILVG ALIRVFIEKM SKSDHEKEVK VSNGISLSSG LVAGGSIVGL IGIVLQVTGI
ITPGTPTGFV ASNGMAIIVL ILLVLATTLP IMKSKVKH
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