| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1480 |
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| Symbol | |
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| ID | 4202193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1677966 |
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| End bp | 1678796 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082358 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_695923 |
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| Protein GI | 110799330 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00172714 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAAA TAAGCCAGTA TTTATTATTT ATACCCTGCA TAGTATTAGT AGCATATTTT
ATGATAGTTC CATTACTAGA TGTAATAATT CCTACTTTCA CTAATACAAA TGGTGGTATG
TTTAGTGCCT ATAAAGAATT TTTCACAGAT TCTTATATGA TGTCAATATT TTTGAGAACC
ATTAAGATAT CTTTAGTATC ATCTATAATT TGCATGTTTA TAGGTGTGCC AGTTTCTTAT
TACATATCAA GAGTTTCTAA AAAGGTGAGA GGTTTTCTTA TAGCCTTAAC AGTCTTTCCC
ATATTAACAA ATTCAGTTGT TCGCTCATTT GCTTGGATGA GTATCTTAGG AAAAAATGGA
ATAATCAATA GTTTATTAAT GAAGTTTAAT TTAATACAAG AGCCATTATC ACTACTATAT
ACAGAAGGAG CTATTATAAT AGGTACGATT TATATTTTCT TACCACTTAT GATTATCTCC
CTAGTAGGAG TTATGGAAAA TATAGATAAT GACTTATTAG AAGCAGCAGA AAGTTTAGGA
GCTAATAGAT TAAAAGCATT CTTTAAAGTT GTATTTCCAC TTAGCTTACC AGGATTAATA
GTTGGAACAG TTTTGGTATT TACAGGTTCC TTAACAGCCT ACACAACACC TCAATTATTA
GGAGGAAATA AAAATACGGT TTTAGCAACT TTAATATACC AAAAAACTAT GACATTAGGT
GATTGGCAGG GGGCCGCAGT TGTAGCAACA ATAATGATTG TAGTCACTTT AATAGTAATA
AAGGGGATTA ACTTCCTAGC ATCAAGATTA GATAAGAGAG GGGTTTCTTA A
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| Protein sequence | MRKISQYLLF IPCIVLVAYF MIVPLLDVII PTFTNTNGGM FSAYKEFFTD SYMMSIFLRT
IKISLVSSII CMFIGVPVSY YISRVSKKVR GFLIALTVFP ILTNSVVRSF AWMSILGKNG
IINSLLMKFN LIQEPLSLLY TEGAIIIGTI YIFLPLMIIS LVGVMENIDN DLLEAAESLG
ANRLKAFFKV VFPLSLPGLI VGTVLVFTGS LTAYTTPQLL GGNKNTVLAT LIYQKTMTLG
DWQGAAVVAT IMIVVTLIVI KGINFLASRL DKRGVS
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