| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1478 |
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| Symbol | |
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| ID | 4201866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1676115 |
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| End bp | 1677146 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082356 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_695921 |
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| Protein GI | 110799006 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00879269 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA TAAACCTACA GAATATAAAT GTTTCTTATG ATAAGAAAAA TAATATATTG
GAAAATCTAA ATTTAAAAGT TAAAAAAGGA GAATTAGTTT CTCTTTTAGG ACCAAGTGGG
TGTGGAAAGA CAACAACATT AAGGGTTGTA GCTGGATTTA TAGAACCAAC AGCAGGAAAG
TTTTTATTAG GAGATGAAGA TTATACAAAT ATACCTGTTC ATAATAGAAA CTTTGGATTA
GTCTTTCAAA GCTATGCATT ATTTCCTCAC TTAACAGTAG AAGAAAATGT AGCTTTTGGA
TTAAAAATGA AAAAGATGAG CAAAGAAGAA ATAAGAAAAA AGGTTGATGA TATATTAAAA
GTTGTTGATA TGAGCCATTT AGCAAAGAGG TATCCAAAGG AATTATCTGG AGGACAAAGA
CAAAGGGTTG CCATAGCAAG AGCCTTAGTA ATAGAGCCAA GTCTTTTATT ACTAGATGAA
CCTTTAAGTA ACTTAGATGC TAAATTAAGA TTAAAAATGA GAGTTGAAAT AAGAAAACTT
CAACAAAAGC TTGGAATAAC AACATTATTC GTAACTCATG ACCAAGAAGA ATGTTTTTCA
ATTTCAGATA AAGTAGCAGT TTTAAATAAA GGGGTAATAG AACAATTTGA TACTCCAGAA
AATATTTATT CAAATCCAGC AACAGAGTTT GTTGCAAGAT TTGTAGGTTT TGAAAACTTT
ATAGATTTAA TAAAGGTATC AGATGGTATA TACAAAAATG AGAGTGGAAT TAACTTAAAA
GTTAACAAGG TTAAGGATAA GAATGAAGTA AAAGCAACTA TAAGACCAGA TGATATAAAG
ATTGTAAAAG AGGATTTAGA AAACACAGTA GATGGAGTTA TAGAGGTTAG AACTTTCTTA
GGAAAGGCAT ACCAATATGA TATTAAAACA AAACTTGGGA ATCTAATTGT AAATAGTGAA
AATGACAGTA TATATGAAAA GGGACAAAAT ATAAAACTTC AATTACCAGT AGATAAAATA
GTAATTTTAT AA
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| Protein sequence | MDLINLQNIN VSYDKKNNIL ENLNLKVKKG ELVSLLGPSG CGKTTTLRVV AGFIEPTAGK
FLLGDEDYTN IPVHNRNFGL VFQSYALFPH LTVEENVAFG LKMKKMSKEE IRKKVDDILK
VVDMSHLAKR YPKELSGGQR QRVAIARALV IEPSLLLLDE PLSNLDAKLR LKMRVEIRKL
QQKLGITTLF VTHDQEECFS ISDKVAVLNK GVIEQFDTPE NIYSNPATEF VARFVGFENF
IDLIKVSDGI YKNESGINLK VNKVKDKNEV KATIRPDDIK IVKEDLENTV DGVIEVRTFL
GKAYQYDIKT KLGNLIVNSE NDSIYEKGQN IKLQLPVDKI VIL
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