Gene CPF_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1446 
SymbolsodF 
ID4203100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1629829 
End bp1630512 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content30% 
IMG OID638082324 
ProductMn/Fe superoxide dismutase 
Protein accessionYP_695889 
Protein GI110801179 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.769471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ATTTTTTAAA ACACAAAAAA AGTCCATTAA TGTATCCAGC TTACTGTGGA 
TCATCTTCAA CTAAAGGGGA AGGTTTTAAA TTAAAACCTT TAGATTATCC TTATGATGCT 
TTAGAGCCAT CAATAGATGC AGAAACAGTA AAAATTCATC ATGACAAACA TCAACAAGCT 
TATGTAGATA AGTTAAATAA AGCTTTAGAA AAACATCCTG AGCTTTATGG CAAAAGCTTA 
TACGATATTT TAAGCAATTT AGATGATATG CCAGAGGATA TTATGGCTGA TTTAGTAAAT 
CAAGGTGGTG GAGTTTATAA CCATGAATTC TACTGGAGCA TTTTAGGAAA AGGATGTAAT 
AGACCAGTTG CTGAAATAGC AGATGCTATA GACAGAGATT TTGGTTCTTT TGAAGAATTC 
AAAGAAAAGT TTAAACAATG TGGAATCTCT ACCTTTGGTT CAGGTTGGGC ATGGTTAGTT 
AGTGATAAAG ATGGAAAGTT AGAAATCATG TCAACTAAGG ATCAATCATC TCCTATTTCT 
TTAGGATTAA TTCCTATATT AACAATGGAT GTTTGGGAAC ATGCTTATTA TTTAAAATAT 
CAAAATAGAC GTCCAGAGTA TATAGACTAT TTCTTCGATA TAATAAACTG GAAAAAGTGT 
GAAGAATATT ATAACAATAG ATAA
 
Protein sequence
MKNNFLKHKK SPLMYPAYCG SSSTKGEGFK LKPLDYPYDA LEPSIDAETV KIHHDKHQQA 
YVDKLNKALE KHPELYGKSL YDILSNLDDM PEDIMADLVN QGGGVYNHEF YWSILGKGCN 
RPVAEIADAI DRDFGSFEEF KEKFKQCGIS TFGSGWAWLV SDKDGKLEIM STKDQSSPIS 
LGLIPILTMD VWEHAYYLKY QNRRPEYIDY FFDIINWKKC EEYYNNR