Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1411 |
Symbol | |
ID | 4201354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1589200 |
End bp | 1590111 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082291 |
Product | hypothetical protein |
Protein accession | YP_695856 |
Protein GI | 110801009 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0848057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACAAGA TTACTTTAGT AATAATGGCA GCAGGAATGG GAAGTAGATA TGGAGGTTTA AAGCAAATTG ATAAAATAGG GCCAAAGGGG GAGACCATAA TAGAATATTC CATTTATGAT GCTATTAAAG CTGGTGTTAC AAAGGTTGTA TTTATAATAA AAAAAGATAT TTTTAAGAAA TTTAGAGAAA CTATAGGGCT TAAAATAGAA AATATAATAG AGACTGAATA TGTTTTTCAA GAAGTTGATA ATTTAGAAAA AGAATTTAAA GGAAATTTTA AAAGAGTTAA ACCTTGGGGA ACTGGACATG CAATTTTATG TTGCAAAGGT TTTATAAAAG AACCTTTCAT AGTTATAAAT GCTGACGATT TTTATGGAAG AGAAACTTAT AAAGTACTTT GTGAAGAAAT TAAAAAAAGT AAGTGTGATT CTGAATACTT TATGGTGGGG TTTAGGGTAG GAAAAACATT AACTGACTTT GGAAGTGTAT CTAGAGGAAT ATGTGATTTG AATTCTAAGG GAGAATTAAT TTCTATTAAA GAAAAAACAA AAATTATGAA AAAAGGAAAT AGTATATGCT ATGAAGAGAA TGGAAATTAT TATAATATTC CTAAAAACAC CTTAGTTTCT ATGAATATTT GGGGATTAAA ACCTAGCATA TTTACAGAAC TAGAATATAG ATTTTTAAAT TTTTTAAAAG ATAAATGTAT AGATAAATGT AAAGAGGAGT TTTATTTGCC TACAGCAATA GATGAGCTTA TAAAAGAAGA TAAAGTTAAG GTTAAGGTTT TAAAAACAAA TGAACAATGG TATGGAGTTA CTTATAAAGA GGATAAAGAA AGCGTTAGGG ATTCTTTAAA AAATTTATCT AAAAAAATTT ATCCAGATGA TTTGTGGGAG GAGTTTAAAT AA
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Protein sequence | MDKITLVIMA AGMGSRYGGL KQIDKIGPKG ETIIEYSIYD AIKAGVTKVV FIIKKDIFKK FRETIGLKIE NIIETEYVFQ EVDNLEKEFK GNFKRVKPWG TGHAILCCKG FIKEPFIVIN ADDFYGRETY KVLCEEIKKS KCDSEYFMVG FRVGKTLTDF GSVSRGICDL NSKGELISIK EKTKIMKKGN SICYEENGNY YNIPKNTLVS MNIWGLKPSI FTELEYRFLN FLKDKCIDKC KEEFYLPTAI DELIKEDKVK VKVLKTNEQW YGVTYKEDKE SVRDSLKNLS KKIYPDDLWE EFK
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