Gene CPF_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1411 
Symbol 
ID4201354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1589200 
End bp1590111 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content27% 
IMG OID638082291 
Producthypothetical protein 
Protein accessionYP_695856 
Protein GI110801009 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0848057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACAAGA TTACTTTAGT AATAATGGCA GCAGGAATGG GAAGTAGATA TGGAGGTTTA 
AAGCAAATTG ATAAAATAGG GCCAAAGGGG GAGACCATAA TAGAATATTC CATTTATGAT
GCTATTAAAG CTGGTGTTAC AAAGGTTGTA TTTATAATAA AAAAAGATAT TTTTAAGAAA
TTTAGAGAAA CTATAGGGCT TAAAATAGAA AATATAATAG AGACTGAATA TGTTTTTCAA
GAAGTTGATA ATTTAGAAAA AGAATTTAAA GGAAATTTTA AAAGAGTTAA ACCTTGGGGA
ACTGGACATG CAATTTTATG TTGCAAAGGT TTTATAAAAG AACCTTTCAT AGTTATAAAT
GCTGACGATT TTTATGGAAG AGAAACTTAT AAAGTACTTT GTGAAGAAAT TAAAAAAAGT
AAGTGTGATT CTGAATACTT TATGGTGGGG TTTAGGGTAG GAAAAACATT AACTGACTTT
GGAAGTGTAT CTAGAGGAAT ATGTGATTTG AATTCTAAGG GAGAATTAAT TTCTATTAAA
GAAAAAACAA AAATTATGAA AAAAGGAAAT AGTATATGCT ATGAAGAGAA TGGAAATTAT
TATAATATTC CTAAAAACAC CTTAGTTTCT ATGAATATTT GGGGATTAAA ACCTAGCATA
TTTACAGAAC TAGAATATAG ATTTTTAAAT TTTTTAAAAG ATAAATGTAT AGATAAATGT
AAAGAGGAGT TTTATTTGCC TACAGCAATA GATGAGCTTA TAAAAGAAGA TAAAGTTAAG
GTTAAGGTTT TAAAAACAAA TGAACAATGG TATGGAGTTA CTTATAAAGA GGATAAAGAA
AGCGTTAGGG ATTCTTTAAA AAATTTATCT AAAAAAATTT ATCCAGATGA TTTGTGGGAG
GAGTTTAAAT AA
 
Protein sequence
MDKITLVIMA AGMGSRYGGL KQIDKIGPKG ETIIEYSIYD AIKAGVTKVV FIIKKDIFKK 
FRETIGLKIE NIIETEYVFQ EVDNLEKEFK GNFKRVKPWG TGHAILCCKG FIKEPFIVIN
ADDFYGRETY KVLCEEIKKS KCDSEYFMVG FRVGKTLTDF GSVSRGICDL NSKGELISIK
EKTKIMKKGN SICYEENGNY YNIPKNTLVS MNIWGLKPSI FTELEYRFLN FLKDKCIDKC
KEEFYLPTAI DELIKEDKVK VKVLKTNEQW YGVTYKEDKE SVRDSLKNLS KKIYPDDLWE
EFK