| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1338 |
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| Symbol | |
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| ID | 4203645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1512556 |
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| End bp | 1513431 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082219 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_695784 |
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| Protein GI | 110799747 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.298228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGTC AAGATTTAAT GAGATTAATT CAAGTTAAGT TTCCAAAGCT TAGTAAAGGA
CAAAAGCTTA TAGCTGAATA TATATTAAAG AATTATGATA AGGCTGCATT TATGACTGCT
GCTAAATTAG GAAATAATGT TGGAGTAAGT GAATCTACAG TAGTTAGATT TGCTACAGAA
CTTGGTTTCT CAGGATATCC AAAGTTACAA AAAGCACTTC AAGAATTAAT AAAGAATAAG
TTAACATCTG TTCAAAGATT AGAGTTATCT AATGACTTTA TAAGTGAAGA AAATGCTTTA
AAGGGCGTTT TAAAAGCGGA TATAGAAAAT ATAAGAGCAA CATTAGAAAA GATAAATCAT
AAAACTTTTG ATGAAGTGGT AAATGAAATA TTCAAAGCTA AAAGAATATA TATAATAGGA
CTTAGAAGTT CTACTGCTCT TGCAGAATTT TTAGGATTTT ACTTAAATTT AATATTAGAT
AATGTAAGAG TAATTTCAAA TGGAATAAGC GATACTTTTG AACAAATGCT TAACTTAGGG
GAAGGTGACT TAGTTATAGG TATAGGTTTC CCAAGATATG CATTAAAAAC AATAGATGCT
TTAGAATTTG CTAAAACTAG AAATGCTAAA ATAGTTTCTA TTACAGATAG CTTAATTTCT
CCTTTAGCAT CTCAATCTGA TCATACACTT ATAGCTCAAA GTAATATGGC TTCATTTGTA
GATTCATTAG TTGCACCTTT AAGTGTAATA AATGCATTAA TCATAGCTGT TGGTATAAGA
GAAAAAGAGA AGATAACATC AACATTTAGT GAGTTAGAAA AGATATGGAA AGACTATAAT
GTTTATTCAT ATAATAAAAA TAATATAGAA CCTTAA
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| Protein sequence | MESQDLMRLI QVKFPKLSKG QKLIAEYILK NYDKAAFMTA AKLGNNVGVS ESTVVRFATE
LGFSGYPKLQ KALQELIKNK LTSVQRLELS NDFISEENAL KGVLKADIEN IRATLEKINH
KTFDEVVNEI FKAKRIYIIG LRSSTALAEF LGFYLNLILD NVRVISNGIS DTFEQMLNLG
EGDLVIGIGF PRYALKTIDA LEFAKTRNAK IVSITDSLIS PLASQSDHTL IAQSNMASFV
DSLVAPLSVI NALIIAVGIR EKEKITSTFS ELEKIWKDYN VYSYNKNNIE P
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