| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1287 |
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| Symbol | |
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| ID | 4201037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1460615 |
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| End bp | 1461913 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082168 |
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| Product | amidohydrolase family protein |
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| Protein accession | YP_695733 |
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| Protein GI | 110801177 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0904726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATATTG AGAAGTTTTT AAGGGAGATT AGAGAAAAAA TAATTAATTA TAGAAGGGAT
TTTCATAAAT ATCCTGAAAT TGCATGGAAA GAATTTAGAA CATCTTCTTT AATTGGAAAA
TATTTAAGAG AAATGGGTTA TGAAATAAAA ATAGGAAAAG AAATAATAAG TGAAGAGCAT
AGGTTAGATG TACCAAACGA ACTTGATTTA AAGAAAAGTT ATGAAAAATC CTTAAATCAA
GGTGCCTATA AAGAATTAAG TGATTATATG ATTGGGGGAT ACACTGGAGT AGTTGGGATT
TTACAAAATG GAGAGGGTCC AACTATTGCT TTAAGATTTG ATATAGATGG AGTAAAAGTA
CTTGAATGTG AAAATAATGA GCATTTTCCT TTTAAAAATG GTTTTTCTTC TTTAAATAGA
GGTATTATGC ATGCTTGTGG ACATGATGGT CATATAGCTA TTGGTCTTGG AGTTGCAGAA
GGGATTATTA GATTTAAGGA ATATTTTAAT GGAACAATAA AGCTTATTTT TCAACCTGGA
GAAGAAAGCG TCTGCGGTGG AAATCCAATG GCTCAATCAG GAATCTTAGA TGATGTAGAT
TATTTATTAA GTGGTCACAT AGGAATAAAG GCAAGGAAAT CAGGAGAAAT AATCTGTGGA
ACAAAGGGAT TTTTAGCAAC ATCTAAAATT AATGCTGAAT TTACAGGGAA GTCTTCCCAT
GCCGCAGTTG CACCTGAAAA AGGGCATAAT GCTTTGCTTT CTGCATCTAC AGCAGTATTA
AACTTAGATG CTATACCAAG AAATGGTGAA GGCATAACAA GAATAAATGT AGGAAAGTTA
ATTGCAGGGA GTGGTAGAAA TGTAATTCCT GGAAAAGCTT TTATGGAAGT AGAGACTAGA
GGAGAAACTA CAGAATTAAA TGAATATATG GAAAGTTATG CAACTAGAAT TCTAAAAGCT
TCTGCAGATA TGCATGATAA TCATGTGAAA ATATCCTGTT TAGGAAGATC CATAAGTGGT
AGTAGTGATA GAGAGTTAAT TGATATTATT AAATGGGAGG CAAAAAATAT AAAGGGATAT
AACAATGTAA TAGATGAAGA AGACTTTGGT GCTAGTGAAG ATATATGTTA TATGATGAAA
AGAGTACAGA AAAATGGAGG AAAAGCATCT TATATAATGT TTGGAAGTGA GTTAAAGGAT
GAACATCATT CTATTAGGTT TGATTTTAAT GAAGAAGATC TGTTTCCAGC AATAAATTTA
TATTTAAGAG TAGTAATGAA TCTTTGCAAT AAAAAATAA
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| Protein sequence | MDIEKFLREI REKIINYRRD FHKYPEIAWK EFRTSSLIGK YLREMGYEIK IGKEIISEEH
RLDVPNELDL KKSYEKSLNQ GAYKELSDYM IGGYTGVVGI LQNGEGPTIA LRFDIDGVKV
LECENNEHFP FKNGFSSLNR GIMHACGHDG HIAIGLGVAE GIIRFKEYFN GTIKLIFQPG
EESVCGGNPM AQSGILDDVD YLLSGHIGIK ARKSGEIICG TKGFLATSKI NAEFTGKSSH
AAVAPEKGHN ALLSASTAVL NLDAIPRNGE GITRINVGKL IAGSGRNVIP GKAFMEVETR
GETTELNEYM ESYATRILKA SADMHDNHVK ISCLGRSISG SSDRELIDII KWEAKNIKGY
NNVIDEEDFG ASEDICYMMK RVQKNGGKAS YIMFGSELKD EHHSIRFDFN EEDLFPAINL
YLRVVMNLCN KK
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