Gene CPF_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1262 
Symbol 
ID4202165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1436715 
End bp1437644 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content25% 
IMG OID638082143 
Productputative cation transporter 
Protein accessionYP_695708 
Protein GI110800323 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0115831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATAT TTAATATTGA GGAAAATTTT AAAGTAGTTG AAGAATGGAA AAAGGATGAG 
TTTCCAGCAT GGATTTTAAT GGAAGAAGAT GAAGTCAATC TTTTAGAAAA AATGTTTTCT 
TATGAGTGTA TAAATGAATG CATTGACTAT AAACAGGAAC AAAGAATAGA CTGTTTCAAG 
GATTATACAT TTATTTTAAT TAATATAATA GAGCAAGTTG AAAAGCAAAT TATCTCTAAA 
GAACTTGATA TATTCTTAGG AAAAAGTTTT ATAGTTACTG TTTATAAGAG TAATATCTCA 
CTTCTATATG ATTTAATTGA AGACATAAAG GAAGAAAAGA ACTGTCAGTT ATTTAAAGTA 
GATAAGAGTC CATCTATTAT TCTTTATTAC ATTTTAGATA GGATTATAAT AAATAACTAT 
AATATAATAT CTGATTTAGA GACTGAAGGA GATAAGATTG AGTTAGAAAT CCTTAAAGAT 
CCTGAAAGCA AGCATTTAAA TTCCCTATTA TTTATAAGAA GAGAAGCTTA TAAACTTAGA 
AAACTTATAA AGCCAATTAG GTATATTGGA GATACCCTTG TTATAGATGA AAATGAAGTA 
ATAGGAGAAG GGAATAAAGT TTATTTTAAA AATATAAATA GTAAAATAGA AAAGTTAATT 
ACATCTTTAG ATACCTTATC ACAAGAGTTA GCAATTGTAA GAGAAGCCTA TGAATCAGAA 
CTAGCCAACA AGACAAATGA ATTAATGAAG GTATTTACAA TAATAACAGC AGTTTTTTTA 
CCTTTAGAAT TAATAACGGC TATATTTTCT ATGAGCTTTG AATCTATGCC CTTTAAAACA 
TGCCCTTATG GATTTTATAT TTTAGTTTTT ATATTAAGTT TAATGGCTAT AATCTTGCTA 
CTAATATTTA AAATAAGAAA ATTTCTATAG
 
Protein sequence
MVIFNIEENF KVVEEWKKDE FPAWILMEED EVNLLEKMFS YECINECIDY KQEQRIDCFK 
DYTFILINII EQVEKQIISK ELDIFLGKSF IVTVYKSNIS LLYDLIEDIK EEKNCQLFKV 
DKSPSIILYY ILDRIIINNY NIISDLETEG DKIELEILKD PESKHLNSLL FIRREAYKLR 
KLIKPIRYIG DTLVIDENEV IGEGNKVYFK NINSKIEKLI TSLDTLSQEL AIVREAYESE 
LANKTNELMK VFTIITAVFL PLELITAIFS MSFESMPFKT CPYGFYILVF ILSLMAIILL 
LIFKIRKFL