| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1258 |
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| Symbol | aspD |
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| ID | 4202542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1432475 |
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| End bp | 1434097 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082139 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_695704 |
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| Protein GI | 110799427 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000391079 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA AAAATCTACA ATTAGAAGAA CTAAAAAAAA TATATGGAAA AATAAGTCCC
TTTGAATTTA AAAATAAATT AATAGATTTA GCTAAGGACA AAAAAAGTGC CCATATTCTT
TTAGATGCTG GACGTGGAAA TCCTAACTGG ACAGCATCTA CGCCACGTGA TGCCTTTTTT
ACCTTTGGTC ATTTTGCTGT ATCTGAAACA AAAAGAACCT TTGAATCTTG TGATTTAGCT
GGAATTCCTC ATAAAGAAGG AATATATAAT AGATTCTTAA ATTTTCTAGA AGAAAACAAA
AATTTTCCAG CCATTGAATT ATTAGAACAA ATAATTGATT ATGGCATAAA TGAAAAAGGA
TTTAATCCTG ATGATTTCCT CTATGAATTA TGTGATGCAA TCATTGGAGA TAATTATCCC
TATCCAGATA GAATGCTTCC TCATATAGAA TCTATAGTTC ATGATTATAT TTTAAAAGAA
CTTTGCTATC TTCCACCTTC AAAAAAATTC AAACTTTTTG CTGTTGAAGG TGCTACTGCC
GCTATGTGCT ATATTTTTGA TTCCTTAATA GCAAATGAGT TACTTCAAAG AAAAGATAAA
ATAGCTATAA TGACACCTAT TTTTACTCCT TATTTAGAAA TTCCTCAACT CCCTAGATAT
GATTTAGAAA GTATATATAT TCATGCTAGT GAAATAAATG AAGAAGGAAG CTATACTTGG
CAGTATCCAG AGGAGGAATT AAACAAATTA AAAGATCCAT CAATAAAGGC TTTATTTTTA
GTTAACCCAA GCAATCCTCC TTCTATGTCC ATTCATGATA AAAGTAAGGA GCTTTTAAAG
GATATAGTTA CTAACTATAA TCCAAATTTA ATGATAATTT CTGATGATGT TTATGGAACC
TTCGTTAATA AGTTTCAATC ATTAGTGGCT GATCTTCCTA ATAACTCCAT AGGTGTTTAT
TCATATTCTA AATACTTTGG AGTAACTGGT TGGAGACTTG GTACCTTGGC CCTTTATGAA
GATAATATAT TTGATAAACT AATAAGTGAA CTGCCTAGTG AGAAAAAGGA AATGGTAAAT
AAAAGATATG AGTCTCTATC AACAGACCCA GAAAAAATTC CATTTATTGA TAGAATAGTT
GCTGATAGCC GCCAAGTAGC ACTAAATCAC ACTGCTGGGC TTTCAACCCC TCAACAAGTA
CAAATGGCCT TCTTTTCTGC ATTCTCTTTA GTTGATAAAG AAAATACATA TAAAAATCAA
ACTATTGATA TATGCCACAG ACGTCAAAAA TTATTATTTG AAGGACTAGA CTTACCGATT
AAAGAAAATC CATATGATGC ATCATATTAT GCTGAGTTTG ATTTATTGCA ATGGGCTCTT
AAAAATTATG GTCCTGAATT TGCAAATTAT TTAGAATCAA ATTATAAACC TGTAGATGTT
TTATATAAAT TAGCTGAGGA ATCATCTATT GTCTTATTAA GCGGTGGTGG ATTCCAAGGG
CCTGAATGGT CAGTAAGAAT ATCTTTAGCT AATTTAGATG ATGATGCTTA TTCAGAAATA
GGAACTGTAC TTAGAAAAAT CCTTGAGGAT TTTGTTCATT ATTGGAAATC TTCAACTAAA
TAA
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| Protein sequence | MTNKNLQLEE LKKIYGKISP FEFKNKLIDL AKDKKSAHIL LDAGRGNPNW TASTPRDAFF
TFGHFAVSET KRTFESCDLA GIPHKEGIYN RFLNFLEENK NFPAIELLEQ IIDYGINEKG
FNPDDFLYEL CDAIIGDNYP YPDRMLPHIE SIVHDYILKE LCYLPPSKKF KLFAVEGATA
AMCYIFDSLI ANELLQRKDK IAIMTPIFTP YLEIPQLPRY DLESIYIHAS EINEEGSYTW
QYPEEELNKL KDPSIKALFL VNPSNPPSMS IHDKSKELLK DIVTNYNPNL MIISDDVYGT
FVNKFQSLVA DLPNNSIGVY SYSKYFGVTG WRLGTLALYE DNIFDKLISE LPSEKKEMVN
KRYESLSTDP EKIPFIDRIV ADSRQVALNH TAGLSTPQQV QMAFFSAFSL VDKENTYKNQ
TIDICHRRQK LLFEGLDLPI KENPYDASYY AEFDLLQWAL KNYGPEFANY LESNYKPVDV
LYKLAEESSI VLLSGGGFQG PEWSVRISLA NLDDDAYSEI GTVLRKILED FVHYWKSSTK
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