Gene CPF_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1244 
Symbol 
ID4202054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1417595 
End bp1418662 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content33% 
IMG OID638082125 
Producthypothetical protein 
Protein accessionYP_695690 
Protein GI110799501 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1299] Phosphotransferase system, fructose-specific IIC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.254524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCT TATTTGGAAC ATTATTATTA TTATTAGTAT TAGGAGGCTT TACATTATTT 
AGTTATAAGG CACCACATGG AATGAAGGCT ATGGGTGGAT TAGCAAATGC TGCCTGTGCA
AGTTTTTTAG TTGAAGCCTT TCATTTAGCA TTTTTTGGAG ATGTATTTCA AATACCTTTT
TTAGCACAAG TAGGTGCATC TAATGGAAGT CTTGGAGGAG TTGCAGCTGC AATTTTAGTA
CCTTTAGCAC TTGGAGTTTC TCCTGTATAT GCAGTATTAA CAGGTCTTGC ATGTTCAGGA
TTTGGAATAT TACCAGGATT TATAGCAGGT TATCTTGGTT CATTTGTTAT AAAGTTTTTA
GAGAAAAAAA TACCAGCTGG TCTTGATTTA ATAGTTATTA TTGTTCTTGG AGCTCCACTT
GTAAGGGGAA TAGCAGCAAT CTCAAATCCA CTTGTAGAAA CAACTCTACA AAATATTGGA
GGAGTTATAA CAGCTACATC AACAGCTAGT CCTATAATGA TGGGAATTAT ACTTGGAGGA
ATAGTAACAG TGGTTGCAAC TGCACCTTTA AGCTCAATGG CTTTAACAGC TATGTTAGGA
TTAACTGGAC TTCCAATGGC AATTGGAGCA TTAGCAGTAT TTGGTTCATC ATTTATGAAT
TTTGTATTCT TTGGAAAAAT GAAATTTGGA AGTAAAAAAG ATACTATTGC AGTTGCTATA
GAGCCTCTTA CACAAGCAGA CATAATTTCT GCAAATCCAA TACCAGTGTA TGTAACTAAT
TTTATAGGGG GAGCTCTATC AGGAATAGTT GTTGCATTAA TGGGTCTTAC AAATAATACA
CCAGGAACTG CTACGCCAAT AGCTGGTTTT GCTGTAATGT TTGCATATAA CCCAGCTATT
AAAGTTTTAA TTACTGCGGC AATAATAATA GTTCTTAATG TTATTGCTGG TATGATAGGA
TATTTAATAT TTAGAAATTA TAAAATAATG AAAGCAGATG AAATTAGAAA TAATAAAGAT
TCTGAAAATA ATTTAAATGT TGAAGATGAA GAAGTTTTAG TAGTTTAA
 
Protein sequence
MQILFGTLLL LLVLGGFTLF SYKAPHGMKA MGGLANAACA SFLVEAFHLA FFGDVFQIPF 
LAQVGASNGS LGGVAAAILV PLALGVSPVY AVLTGLACSG FGILPGFIAG YLGSFVIKFL
EKKIPAGLDL IVIIVLGAPL VRGIAAISNP LVETTLQNIG GVITATSTAS PIMMGIILGG
IVTVVATAPL SSMALTAMLG LTGLPMAIGA LAVFGSSFMN FVFFGKMKFG SKKDTIAVAI
EPLTQADIIS ANPIPVYVTN FIGGALSGIV VALMGLTNNT PGTATPIAGF AVMFAYNPAI
KVLITAAIII VLNVIAGMIG YLIFRNYKIM KADEIRNNKD SENNLNVEDE EVLVV