| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1238 |
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| Symbol | |
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| ID | 4201260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1408498 |
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| End bp | 1410330 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082119 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_695684 |
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| Protein GI | 110799990 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.247532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTAA TACCAAGACC AAAAAGTGTA ATTAATCATG AAGGTGAATT TTTTATAGAA
AGAGATACTG AAATTATATT AAGTAGTGAA TTATCCTTTG AAGATTTAAA TTTGGCAATT
ATGATTCAAA AGGAAATAGA AAAAGTATTA GATTTTAAAC TTAACATAAA TAAACTTTTT
ATGGATAAGA AATATAGTAA CTCAATAATT TTAAGAGAAT TTAAATTTGA AAATGAAGAG
GAATATAAAA TAGAAATAAA GGAGAATCAG GTAATAATAG AAGGGTTTGG TGCTGGATTA
TTCTATGGAT GTCAGAGCTT TAGACAGCTT GTAAGAGAGT TTGGAGCATG TATTCCAAAT
CTAACAATAG AAGATTCTCC ATATTTTAAA TATCGTGGAT TTTATCATGA TGTAACAAGG
GGAATGGTAC CAACCTTAGA TACATTAAAA AGATTAGTTG ATAAGGCAGC TTTTTATAAA
ATAAATCAGT TGCAACTATA TATAGAGCAT ACCTTTGCTT TTAAGGGAAT GAGTGAAGTT
TGGATGGATA AGGATCCTTT AACAGCGGAG GAAATATTGA TTTTAGACAA GTATTGCAAA
GAGAGACATG TGGAACTTGT ACCATCATTA TCAACTTTTG GTCATCTATA TGAAGCTTTA
AGAAGTAAAT CCTTTAGAGA ACTTTGTGAA TTAGAAATAG GAGATGAAGA ATATTCTTTT
GTAGATAGAA TGGCACATCA TACTTTAGAT GTTACTAATC CTAAAAGTTT AGACTTTGTT
GAATCAATGC TTTTAGAATT TATTCCTTTA TTCAGTTCAG ATAAGTTTAA TATTTGCTGT
GATGAAACCT TTGATTTAGG AAAAGGAAAG AGTAGAGAGA AGGCTGAAAA ATTAGGAGTA
GGTAAAATAT ATACAGAGTT TTTAAATAAG GTATACAACA TTGTAAAAAG GTTCAATAAA
AATGTTATGT TCTGGGGAGA TATAATAGTT GGATATCCAG AGCTTTTAAG TGATATACCA
GAGGATTTAA CTTGTTTAAC TTGGAACTAT CATCCACAGG CTAATGATGT AGCCACAAAA
ATTATAGCAG AGAACAATAA AGTACAATAT GTTTGCCCTG GTGTAGGTGG ATGGAATATG
ATGATGAATC TTATAGAAGG CTCTTTTAGT AATATAAGAA GAATGGTTAA CCATGGAATG
AAATATGGAG CTATAGGTGT TTTAAATACA AACTGGGGAG ACTATGGAAA TATAAATCTA
TTAGCTAATT CAATGCCATC TATGATTTAT GGAGCAGGAA TTTCATGGAA TCCAAAGGAA
GAGGAGTTTA ATGAAATTTT TAAGTCTATA TCCCTTATGG AATTTGGTGA TGAATCTATG
AAGGTGGTTT CTTTAATGGA TAAGCTTTCT AAAAATCAAG TTGCAGGTTG GGGAGAACTT
GTTAGATGGA AAGAAAAGTT TAATGAAAGA GAAGAAACTA AGGAAGAAAT TAAGAATATA
GATACTTTAA AAGTTTTTGA AGGATATAAG GTTGCTTCAG AGGTAAGAAG AGAGTTTATT
AAATTACTTA AAAATACAGA GGATAAAGAA GCTATTCAAA GCTTTATTGT GTCTTCAAAG
GGATGGGAGC TTATAGATAA ATTCTTCATG GTATTACTTG AAAGAGAGTT TAATAAAAAA
AGTTTATTAG ATATAGATAA AAAAGACTTA GCTAAGGATT TAGAGCTTTG GTTTTATGAT
TACACATCAA TATGGAGAAA ATATAATAAA GAAAGCGAGC TTAATAGAAT AAGAGAAGTT
ATAGTATATA TGTGCTCATA TTTAAGGGGT TAA
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| Protein sequence | MHLIPRPKSV INHEGEFFIE RDTEIILSSE LSFEDLNLAI MIQKEIEKVL DFKLNINKLF
MDKKYSNSII LREFKFENEE EYKIEIKENQ VIIEGFGAGL FYGCQSFRQL VREFGACIPN
LTIEDSPYFK YRGFYHDVTR GMVPTLDTLK RLVDKAAFYK INQLQLYIEH TFAFKGMSEV
WMDKDPLTAE EILILDKYCK ERHVELVPSL STFGHLYEAL RSKSFRELCE LEIGDEEYSF
VDRMAHHTLD VTNPKSLDFV ESMLLEFIPL FSSDKFNICC DETFDLGKGK SREKAEKLGV
GKIYTEFLNK VYNIVKRFNK NVMFWGDIIV GYPELLSDIP EDLTCLTWNY HPQANDVATK
IIAENNKVQY VCPGVGGWNM MMNLIEGSFS NIRRMVNHGM KYGAIGVLNT NWGDYGNINL
LANSMPSMIY GAGISWNPKE EEFNEIFKSI SLMEFGDESM KVVSLMDKLS KNQVAGWGEL
VRWKEKFNER EETKEEIKNI DTLKVFEGYK VASEVRREFI KLLKNTEDKE AIQSFIVSSK
GWELIDKFFM VLLEREFNKK SLLDIDKKDL AKDLELWFYD YTSIWRKYNK ESELNRIREV
IVYMCSYLRG
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