| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1217 |
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| Symbol | |
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| ID | 4201667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1381694 |
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| End bp | 1383316 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082098 |
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| Product | amino acid permease family protein |
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| Protein accession | YP_695663 |
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| Protein GI | 110800992 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0249423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCAA AAGAAAAAAG TAAATTAACC CTAACAGCCT TAATCCTTAT GATCTTTACA
TCTGTTTATG GCTTTACTAA TATGCCAAGA ACCTTTTATT TAATGGGTTA TAGCGGAATC
ATATGGTATA TAATGTCAGC TATTTTATTT TTTATTCCTT ATGCTTTTAT GATGGCTGAA
TATGGTGCTG CCTTTAGAAA AGAAAAGGGA GGAATATATT CTTGGATGGC TAAATCAGTA
AACCCTAAGT TTGCTTTTAT AGTAACCTTT ATGTGGTTTT CTTCAAATCT AATATGGATG
GTATCTGTAT CATCATCTAT ATGGATTCCT TTATCTAATG TATTTTTTGG TAAAGACACA
ACTTCCACTT GGAATATATT TGGTTTAACA GGCCCTCGTG CAATGGCTGT GCTAGCTATA
ATATTACTAA TAACAATAAC ATTTATTTCT TCTAAAGGAT TAAATAAAAT TTCAAAAATT
ACATCCATAG GAGGAACAGT TGTTGCCTTA GCTAATGTAG TTTTAATTCT TGGTGGTTTT
TTCGTACTAG CAAGCAATGG TTTTGAATCA GCTCAAGGTT TTAATATTGA ACAGTTCATA
CATTCTCCAA ACCCTGCATA TCAATCCCCT TTAGGCGTAC TTGGCTTCGT TGTATTTGCA
ATATTTGCTT ATGGTGGAAT AGAAGTAGTT GGTGGATTAG TTGACCAAAC TGAAAATCCT
AAAAAGAATT TCCCTAAAGG AATAAAAATT TCTGCCTTTG TAATTGTTAT TGGTTATGCA
ATAGGAATTT TATGTATTGG TTTCTTTGTT AATTGGAATA GAGACTTAAC TGGTCCTGAT
GTAAATATGG CAAATATAGC ATATATTGTA GTAAATTATC TTGGTTATTA CATAGGAGAA
GCAATTGGCT TAAGTGCTAA TGCTTGTACA ATGTTAGGTA ACTTCTTTGC TAGATTTATA
GGACTTTCAA TGTTTTTAGC ACTTATAGGT GCATTCTTCG CTTTAAGCTA CTCTCCTTTA
AAACAATTAA TAGAAGGTAC TCCTAAGGAT ATTTGGCCTG AAAAATGGAC AAGATTAAAC
AAAGAAAATA TGCCAGCTAC AGCTATGTGG ATTCAATGTA TAACAGTAAT TATATTTGTT
TTATGTTGCT CAATGGGTGG CGAAGATTCA TCTAAATTCT TTAACTATTT AATACTTATG
GGGAATGTAG CCATGACATT ACCTTATATG TTTTTATCCT TTGCTTTTTC ATTCTTCAAG
AAGAAAAAAG AAATTGTAAA ACCTTTTGAA GTATATAAAA ATTATAAGAG CGCTTTAGTT
TGGTCTATCA TAGTAACATT AACAGTTGGT TTTGCTAATA TATTTACAAT AATACAACCT
CTTACTTCAG AAAATAAAGA TTATGTTGCT GTAATCTTCC AAATTTCTGG TCCTATTATA
TTTGGATTCT TAGCATGGTT AATATATAGA AGATATGAAA ACAATGTACT AAAAAAACAA
ATTTCAAATA TTGATAATAA AATTGATACA GAACTTGAAA AAATAGAAAA AGCTGAAGAA
GAAGTTACAA GTGAAACAAT AGGAGTAATA GATATAGAAG TTCATGATGA TGATTCTAAA
TAA
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| Protein sequence | MESKEKSKLT LTALILMIFT SVYGFTNMPR TFYLMGYSGI IWYIMSAILF FIPYAFMMAE
YGAAFRKEKG GIYSWMAKSV NPKFAFIVTF MWFSSNLIWM VSVSSSIWIP LSNVFFGKDT
TSTWNIFGLT GPRAMAVLAI ILLITITFIS SKGLNKISKI TSIGGTVVAL ANVVLILGGF
FVLASNGFES AQGFNIEQFI HSPNPAYQSP LGVLGFVVFA IFAYGGIEVV GGLVDQTENP
KKNFPKGIKI SAFVIVIGYA IGILCIGFFV NWNRDLTGPD VNMANIAYIV VNYLGYYIGE
AIGLSANACT MLGNFFARFI GLSMFLALIG AFFALSYSPL KQLIEGTPKD IWPEKWTRLN
KENMPATAMW IQCITVIIFV LCCSMGGEDS SKFFNYLILM GNVAMTLPYM FLSFAFSFFK
KKKEIVKPFE VYKNYKSALV WSIIVTLTVG FANIFTIIQP LTSENKDYVA VIFQISGPII
FGFLAWLIYR RYENNVLKKQ ISNIDNKIDT ELEKIEKAEE EVTSETIGVI DIEVHDDDSK
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