Gene CPF_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1179 
Symbol 
ID4203004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1344098 
End bp1344526 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content34% 
IMG OID638082060 
Producthypothetical protein 
Protein accessionYP_695625 
Protein GI110799882 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.459415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAAATGATGT AAAAGAATTA AGCTTAGAAA TAGTTAAAGA AATGGCTAAA 
GCTGCTGAAG CTAAAGCTTG TGAAATGAAT GTTCCAGTTA TATTTGCAGC AGTTGATGCT
GGTGCTAATT TAATGCTTAT GCACAGAATG GAAGATGCAT TTTTAACAAG TATTGATATA
GCTATAAACA AAGCTTATAC AGCTGCATGT TTAAAGCAAG GAAGTCATGA AATTGCAGAA
TGCGTTCAAC CAGGACAAAG CCTTTATGGT CTTCAATTAA CAAACAATTG TAGAATAGTA
CCATTTGGTG GTGGATTCCC AATTATAGTT GATGGAAAAG TTGTAGGAGC TGTTGGTGTA
AGTGGTGGAA CAGTTGAAGA AGATATGGCT ATAGCACAAG CAGCAGTAGA TTGCTTTAAC
AATAAGTAA
 
Protein sequence
MKKLNDVKEL SLEIVKEMAK AAEAKACEMN VPVIFAAVDA GANLMLMHRM EDAFLTSIDI 
AINKAYTAAC LKQGSHEIAE CVQPGQSLYG LQLTNNCRIV PFGGGFPIIV DGKVVGAVGV
SGGTVEEDMA IAQAAVDCFN NK