Gene CPF_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1155 
Symbol 
ID4201859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1322470 
End bp1323156 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content30% 
IMG OID638082036 
ProductMgtC family protein 
Protein accessionYP_695601 
Protein GI110798999 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0257745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA GTCAAGTAAT AATAAGGATA ATATTATCTA TAATTATAGG AGGTCTTGTT 
GGATATAATA GAGAGTATAA AAATAGGCCA GCGGGATTTA GAACTCATAT GTTAGTATGT 
TTAGGAGCCA CTATTGCAGC CTTAATTCAG GTACAAGTTG GTTATTTTGT ACTTGAAGAA 
ATAGCCAAGA ATCAAGCTAT GTCAAGTATA TTACATGTTG ATGTAGGAAG AGTTATATGC 
CAAGTTATAT CAGGGGTAGG ATTTTTAGGA GCAGGAGCTA TAATTCAAAC TAAAGGTACT 
GTAAAGGGTT TAACAACAGC TGCCTCTATG TGGGCAGTAG CAGGGGTTGG TATTGCTATA 
GGAATGGGAT TCTATGTTAT AAGCATTTTA AGTGGTGTTA GTATATTAAT AGTTTTAATT 
TCTCTAAAGA AATTTGAAGA TAGATTTATA ATAAACACTA GAAACTTAAG TATAGAAATA 
AGGTGTAAAG ATCTTAAAGC ATTAAATGAA ATAAATGATT TTTTTGAGGA ATATCAAATA 
AAAATAAGTA ATATTGAGTT AATTAGTGAA GAGGTTTATC AATATAAAAT AGAAGCTCCA 
CAGTTTGTAA CAATAAATGA GATTATAAGT GGGCTTATAG CTAATGAAAA TATAAGTAGA 
GTAAAGGAAA TAAACTATAG TTGCTGA
 
Protein sequence
MNISQVIIRI ILSIIIGGLV GYNREYKNRP AGFRTHMLVC LGATIAALIQ VQVGYFVLEE 
IAKNQAMSSI LHVDVGRVIC QVISGVGFLG AGAIIQTKGT VKGLTTAASM WAVAGVGIAI 
GMGFYVISIL SGVSILIVLI SLKKFEDRFI INTRNLSIEI RCKDLKALNE INDFFEEYQI 
KISNIELISE EVYQYKIEAP QFVTINEIIS GLIANENISR VKEINYSC