| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1077 |
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| Symbol | |
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| ID | 4201672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1229188 |
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| End bp | 1230621 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638081958 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_695523 |
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| Protein GI | 110800997 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.182725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA GAAAAAAAGC ATTATCACTG ATTTTAAGTG GTATTGTATG TTCATCTTTA
ATACTTACAG GCTGTGGAAA TAGCAAAGAA GAGGAAAGTA AGGAAACTGT TAATTTAACT
TGGTATGTTA TAGGTGATGA GCCAGCTGAT AATGACATTG TTGAAGAAGA AGTAAATAAA
TATTTAAAAG ATAAAATAAA TGCTACAGTA GATATAAAAC ATATACCTTT TGGGGATTAT
ACTAAGAAAA TGAGTGTTAT TAGTAATTCA GGGGAACCTT ATGATCTTGC CTTTACATGT
TCTTGGGCAT TTCCTTATTT AGAATATGCT AGAAAAGGAG CCTTTTTAGA GTTAAATGAT
TTATTAGATA CAGAAGGAGC ACCATTAAAG AAAGAAATAA ACAAAGAGTT ATGGAAGGGT
GCAGAGATAG ATGGTAAAAT ATATGCTGTT CCAAATCAAA AAGAAATAGC ATTAGCACCT
ATGTGGGTAT TTGATAAAGA GCTTGTTGAA AAGTATAATA TTCCTTATGA AAATATACAT
TCAGTAAACG ATTTAGAACC TTGGTTAAAA TTAGTAAAAG AAAAAGAACC GGATTTTATT
CCATTTTATA CTCAAGGAGA TTCAATTCCT TTAGACTTTG ATGATATAGT AAATCCATTA
GGTATATTCT ATAATGATAA GAATTTGACA GTAACAAATA AATTTGAATC AAAAGAAATG
AAGGATATGT TATTAAAATT AAGAGAATAT TATGAAGCTG GATACATAAA TCAAGATGCA
GCAGTAACTG ATATGAAACC AGAAGTAAAA AGATTTGTAT GGAAAGCAGA TGGACAACCA
TATGCTGAAA ATATATGGGG AAAATCTTTA GGTAGGGAAG TAGTAACTTC ATCAATAATA
CCACCATATA TAACTAATAA TTCAACAACT GGTGCAATGA CTGCAATTTC TGCTAACTCT
AAACATCCTA AGAAGGCAAT GGAGTTATTG ACTTTAGTAA ATACTGATAC AAATTTAAGA
AACTTATTGA TGTTTGGAAT AGAGGGAAAA CATTATGAAA AAATAAATGA CAAGCAAATA
AAGAAATTTG ATGGAAAGAA ATATGATGTT GTTAGCTGGG CATATGGAAA CTTACTTGGT
ACTTATGTTT CAGAAAATGA CCCTATAGAT AAGTGGGAGG CTTTTGAAAA ATTCAATAAT
TCAGCTAAGG TTTCTCCAAT ATTAGGATTT AAATTTAATT CGGAAAACGT TTCAAATCAA
ATTTCTGCTA TAAATAATGT TTTACAGGAA TTTGAAAGAG CATTATATAC AGGTTCAATA
GATCCTGAAG TTGGACTAAA TGATTTAAAT AAGAAATTAA ATGATTCAGG TATAAATGAA
GTTAAAGATG AAATACAAAA ACAATTAAAT GAATGGAAAG CAAAAAATAA TTAG
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| Protein sequence | MIKRKKALSL ILSGIVCSSL ILTGCGNSKE EESKETVNLT WYVIGDEPAD NDIVEEEVNK
YLKDKINATV DIKHIPFGDY TKKMSVISNS GEPYDLAFTC SWAFPYLEYA RKGAFLELND
LLDTEGAPLK KEINKELWKG AEIDGKIYAV PNQKEIALAP MWVFDKELVE KYNIPYENIH
SVNDLEPWLK LVKEKEPDFI PFYTQGDSIP LDFDDIVNPL GIFYNDKNLT VTNKFESKEM
KDMLLKLREY YEAGYINQDA AVTDMKPEVK RFVWKADGQP YAENIWGKSL GREVVTSSII
PPYITNNSTT GAMTAISANS KHPKKAMELL TLVNTDTNLR NLLMFGIEGK HYEKINDKQI
KKFDGKKYDV VSWAYGNLLG TYVSENDPID KWEAFEKFNN SAKVSPILGF KFNSENVSNQ
ISAINNVLQE FERALYTGSI DPEVGLNDLN KKLNDSGINE VKDEIQKQLN EWKAKNN
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