| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1058 |
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| Symbol | |
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| ID | 4201841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1206647 |
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| End bp | 1207432 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638081939 |
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| Product | putative Cof-like hydrolase |
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| Protein accession | YP_695504 |
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| Protein GI | 110800254 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00385652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTAT TAGCAAGTGA TTTTGATGGA ACATTATTAG TAGATAAAAA AATTAATAAG
AGAGATATTG AAGGAATTAA AGCTTTACGT AAGAAAGGTC ATAAATTCAT TATATCTACA
GGTAGAACAC TTTTAACTAT GGAGGGAGTA ATTGAAAAGT ATGACTTAGA GTTTGATTAT
TTGGTTCTTT GCAATGGAGC TGTAATACTT GATAAGAATA AAAATGTAAT AAAAAATAAC
CTTGTTGATT TTGAGGCAGT TAAAAAGATT GTAGAAGAGT TTGCAGATCA AGATAAAATA
ATGATTTATT TTGATGATGG AAATGGAATG AAACTAATAG AAAATAAAAG CGTTGATATG
AAAAATCTAT ATTTTTCTGA AGAAATTGAC TTTGATTTAG TAAAAAAAGA AGAGATATTA
GATTTAAAAA GTGGAGCGGT AATCTTAAGT ATATGCACCT CAGATGCCTC TGTAGAAAGA
GGAGAAGAAA TAAAGAAAAG ATTAATAGAA ATCTTTGGTG ATGAACTTTC CATATTCAGA
AATCAGTTTT TTGTGGACAT ATCCTCAAAA GGTTCATCAA AAGGGGAGGG CCTAAAGGAA
GTTTTAAAAC TAGAAAACAA AAATCTTAAT GATATATACA CCATAGGTGA TTCTTTTAAT
GATATATCTA TGTTTGAAAT AACAGATAAT AGCTATACCT TCAACAGAGC AGAAGAGGGT
GTAAAGGCAC ATGCCAATAA TCATGTAGAC TATGTTCATG AAATTGTTGA CCATATAATA
AAATAG
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| Protein sequence | MKLLASDFDG TLLVDKKINK RDIEGIKALR KKGHKFIIST GRTLLTMEGV IEKYDLEFDY
LVLCNGAVIL DKNKNVIKNN LVDFEAVKKI VEEFADQDKI MIYFDDGNGM KLIENKSVDM
KNLYFSEEID FDLVKKEEIL DLKSGAVILS ICTSDASVER GEEIKKRLIE IFGDELSIFR
NQFFVDISSK GSSKGEGLKE VLKLENKNLN DIYTIGDSFN DISMFEITDN SYTFNRAEEG
VKAHANNHVD YVHEIVDHII K
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