Gene CPF_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0997 
Symbol 
ID4202705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1148755 
End bp1149531 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content33% 
IMG OID638081879 
Productputative lipoprotein 
Protein accessionYP_695444 
Protein GI110798657 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.241691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA GAAATTATTT AATTAGTTTA TTGGCTGTGG TACTTAGTTT AGGAGTTTTA 
GTTGGCTGTG GAGATAAGAC AAACACTTCT AATGAGGGGG CTTCTGTAAA TAGCTCAGAA
AATAGTGATG CTGCTAGTTC AAAAGATTCT GCTGATGTGG TAAAGGATAA GGGGGAATCA
GATAAAGCAC AGGCTAAGGA TGCTGATTCT AAGGATAAAG AAGCTACAAA TAAAGATGAG
AGTGAAAAGA AAGAAGAGGA TATTAAGAAT GATAGCAGCA CTAAGGAGAC TGCTAAAGTA
GATAATTCTA ATAAAAATGA AAGTAAAGGA GCAAGTAATT CTTCTAAGAA GGAAGAGAGT
AAGAGTGCTT CTAAAAAGGA GAATTCAAAG GATGAAAGTA GCTTAGCAAA ATCAAAATCA
GAGTATCTTC AAAAGATGAA AAATATAGAT AGTGAGTCTG AGAAGTTAGA TAAAGAGTAT
GAAACTGAGG AAGGCTCAAC ACAAATGGGG ATGAATATTA TTAGCGGAAA GCAAGCTAAA
TTATATGATG CTGAGTTAAA TCAAATTTAT GATTACTTAA AACAAAATTT AAGCAAGGAA
AAATCTAAGG AACTTGAGAA GAGTGAAATG GCTTGGATTA AAGAAAAAGA AAGTAATATA
GCTGAAATAA AGAAACAATA TGAAGGCGGT TCAGTTACTC CTCTTATGGT AAATTCAGAG
GTGGCAAAGG AAAGTAAGGA AAGATGCTAT TATTTAATAG ATAATTATAT GAAGTAG
 
Protein sequence
MKKRNYLISL LAVVLSLGVL VGCGDKTNTS NEGASVNSSE NSDAASSKDS ADVVKDKGES 
DKAQAKDADS KDKEATNKDE SEKKEEDIKN DSSTKETAKV DNSNKNESKG ASNSSKKEES
KSASKKENSK DESSLAKSKS EYLQKMKNID SESEKLDKEY ETEEGSTQMG MNIISGKQAK
LYDAELNQIY DYLKQNLSKE KSKELEKSEM AWIKEKESNI AEIKKQYEGG SVTPLMVNSE
VAKESKERCY YLIDNYMK