Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0997 |
Symbol | |
ID | 4202705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1148755 |
End bp | 1149531 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638081879 |
Product | putative lipoprotein |
Protein accession | YP_695444 |
Protein GI | 110798657 |
COG category | [S] Function unknown |
COG ID | [COG3755] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.241691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA GAAATTATTT AATTAGTTTA TTGGCTGTGG TACTTAGTTT AGGAGTTTTA GTTGGCTGTG GAGATAAGAC AAACACTTCT AATGAGGGGG CTTCTGTAAA TAGCTCAGAA AATAGTGATG CTGCTAGTTC AAAAGATTCT GCTGATGTGG TAAAGGATAA GGGGGAATCA GATAAAGCAC AGGCTAAGGA TGCTGATTCT AAGGATAAAG AAGCTACAAA TAAAGATGAG AGTGAAAAGA AAGAAGAGGA TATTAAGAAT GATAGCAGCA CTAAGGAGAC TGCTAAAGTA GATAATTCTA ATAAAAATGA AAGTAAAGGA GCAAGTAATT CTTCTAAGAA GGAAGAGAGT AAGAGTGCTT CTAAAAAGGA GAATTCAAAG GATGAAAGTA GCTTAGCAAA ATCAAAATCA GAGTATCTTC AAAAGATGAA AAATATAGAT AGTGAGTCTG AGAAGTTAGA TAAAGAGTAT GAAACTGAGG AAGGCTCAAC ACAAATGGGG ATGAATATTA TTAGCGGAAA GCAAGCTAAA TTATATGATG CTGAGTTAAA TCAAATTTAT GATTACTTAA AACAAAATTT AAGCAAGGAA AAATCTAAGG AACTTGAGAA GAGTGAAATG GCTTGGATTA AAGAAAAAGA AAGTAATATA GCTGAAATAA AGAAACAATA TGAAGGCGGT TCAGTTACTC CTCTTATGGT AAATTCAGAG GTGGCAAAGG AAAGTAAGGA AAGATGCTAT TATTTAATAG ATAATTATAT GAAGTAG
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Protein sequence | MKKRNYLISL LAVVLSLGVL VGCGDKTNTS NEGASVNSSE NSDAASSKDS ADVVKDKGES DKAQAKDADS KDKEATNKDE SEKKEEDIKN DSSTKETAKV DNSNKNESKG ASNSSKKEES KSASKKENSK DESSLAKSKS EYLQKMKNID SESEKLDKEY ETEEGSTQMG MNIISGKQAK LYDAELNQIY DYLKQNLSKE KSKELEKSEM AWIKEKESNI AEIKKQYEGG SVTPLMVNSE VAKESKERCY YLIDNYMK
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