| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0926 |
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| Symbol | |
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| ID | 4201278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1089077 |
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| End bp | 1090141 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 24% |
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| IMG OID | 638081808 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_695375 |
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| Protein GI | 110800856 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000719898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTATA ACGTAACTTA TAGGCAAAAA GATAAAGGAT GGCAATTTAT AATAAGCTAT
AAGGATTACA ATGGAAAATG GAGGCAAAAA TCTAAACAAG GATTTAAGAC AAAAAAAGAA
GCTAAACCTA TTGCTGAAAA GATGCTACAA GATTTAAAGA AAAATATAAA AACAAGCAAT
AATAGTTTTG GGAAAATAAC TTTTAAAGCT TTTTCAGATA TGTATCTAGA GCATGAAAAG
CTATACAAAG AACCTAAGAC AATAGACGGC TTAGTAACAG TGCTTCATAG GTTTCAAGAT
TTAAATGACA AAGAACTTTG CAAAATAACT AACTTAGATA TACAAAAATT AATAGATAAT
ATGACTAAGG AACATCTTAA TAATAATACA ATAAGATATT ATTTAAAAAT ATTAAATAGC
ATATTTTTAT GTGCAAAATT TAAATACAAT ATACTAGATG AAGTTCCAAG TAAATATATA
AAAATAGGTA AACCAATACC AACTAAGAAA AAGGCACTGA ATGATGATGA AATTAACGAT
TTATTATTAA AATTTAAAAA TAATAAATAT TATCTAGTAG TATATTTAGC TGTTAATACA
GGTATGAGAA TCGGTGAAAT TCTAGGTTTA ACATGGAATG ATATAGATTT TAATAATTGT
CTAATAAGTG TTAATAAACA ATGGAAAATA CTAAAAGATA ATTCATGGGG ATTAGGTAGT
GTTAAAAGTA AAAATTCAAT TAGAATTATT CCCATTTCTA ATTCAGTTTC TGAAGAACTA
TTAAAATATA AAACTATAAT AAATATAGAT AATAGAGTTT TCAATTTTAA AAGTAAAAAC
ACTATTCTTT CAAGAGTAAA CATACTTTTA AAAGAATATG GTTTCAACAT TTCTCTTCAT
GAATTAAGAC ACACATACGC TACTAAATTA ATTGCTAATG GAGTTGATTT TAAAACTGCT
GCAAAAATAT TAGGTCATTC AGTAGAACAA ACTATGAAAG TATACTCTCA TGTCAATAAT
GATATGTTTA ATAAAGCACA TTCTATCATA GAAAATATTT TTTAA
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| Protein sequence | MEYNVTYRQK DKGWQFIISY KDYNGKWRQK SKQGFKTKKE AKPIAEKMLQ DLKKNIKTSN
NSFGKITFKA FSDMYLEHEK LYKEPKTIDG LVTVLHRFQD LNDKELCKIT NLDIQKLIDN
MTKEHLNNNT IRYYLKILNS IFLCAKFKYN ILDEVPSKYI KIGKPIPTKK KALNDDEIND
LLLKFKNNKY YLVVYLAVNT GMRIGEILGL TWNDIDFNNC LISVNKQWKI LKDNSWGLGS
VKSKNSIRII PISNSVSEEL LKYKTIINID NRVFNFKSKN TILSRVNILL KEYGFNISLH
ELRHTYATKL IANGVDFKTA AKILGHSVEQ TMKVYSHVNN DMFNKAHSII ENIF
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