Gene CPF_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0926 
Symbol 
ID4201278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1089077 
End bp1090141 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content24% 
IMG OID638081808 
Productphage integrase family site specific recombinase 
Protein accessionYP_695375 
Protein GI110800856 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000719898 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTATA ACGTAACTTA TAGGCAAAAA GATAAAGGAT GGCAATTTAT AATAAGCTAT 
AAGGATTACA ATGGAAAATG GAGGCAAAAA TCTAAACAAG GATTTAAGAC AAAAAAAGAA
GCTAAACCTA TTGCTGAAAA GATGCTACAA GATTTAAAGA AAAATATAAA AACAAGCAAT
AATAGTTTTG GGAAAATAAC TTTTAAAGCT TTTTCAGATA TGTATCTAGA GCATGAAAAG
CTATACAAAG AACCTAAGAC AATAGACGGC TTAGTAACAG TGCTTCATAG GTTTCAAGAT
TTAAATGACA AAGAACTTTG CAAAATAACT AACTTAGATA TACAAAAATT AATAGATAAT
ATGACTAAGG AACATCTTAA TAATAATACA ATAAGATATT ATTTAAAAAT ATTAAATAGC
ATATTTTTAT GTGCAAAATT TAAATACAAT ATACTAGATG AAGTTCCAAG TAAATATATA
AAAATAGGTA AACCAATACC AACTAAGAAA AAGGCACTGA ATGATGATGA AATTAACGAT
TTATTATTAA AATTTAAAAA TAATAAATAT TATCTAGTAG TATATTTAGC TGTTAATACA
GGTATGAGAA TCGGTGAAAT TCTAGGTTTA ACATGGAATG ATATAGATTT TAATAATTGT
CTAATAAGTG TTAATAAACA ATGGAAAATA CTAAAAGATA ATTCATGGGG ATTAGGTAGT
GTTAAAAGTA AAAATTCAAT TAGAATTATT CCCATTTCTA ATTCAGTTTC TGAAGAACTA
TTAAAATATA AAACTATAAT AAATATAGAT AATAGAGTTT TCAATTTTAA AAGTAAAAAC
ACTATTCTTT CAAGAGTAAA CATACTTTTA AAAGAATATG GTTTCAACAT TTCTCTTCAT
GAATTAAGAC ACACATACGC TACTAAATTA ATTGCTAATG GAGTTGATTT TAAAACTGCT
GCAAAAATAT TAGGTCATTC AGTAGAACAA ACTATGAAAG TATACTCTCA TGTCAATAAT
GATATGTTTA ATAAAGCACA TTCTATCATA GAAAATATTT TTTAA
 
Protein sequence
MEYNVTYRQK DKGWQFIISY KDYNGKWRQK SKQGFKTKKE AKPIAEKMLQ DLKKNIKTSN 
NSFGKITFKA FSDMYLEHEK LYKEPKTIDG LVTVLHRFQD LNDKELCKIT NLDIQKLIDN
MTKEHLNNNT IRYYLKILNS IFLCAKFKYN ILDEVPSKYI KIGKPIPTKK KALNDDEIND
LLLKFKNNKY YLVVYLAVNT GMRIGEILGL TWNDIDFNNC LISVNKQWKI LKDNSWGLGS
VKSKNSIRII PISNSVSEEL LKYKTIINID NRVFNFKSKN TILSRVNILL KEYGFNISLH
ELRHTYATKL IANGVDFKTA AKILGHSVEQ TMKVYSHVNN DMFNKAHSII ENIF