Gene CPF_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0845 
Symbol 
ID4203278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1000650 
End bp1001792 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content30% 
IMG OID638081728 
Productaminotransferase, class V 
Protein accessionYP_695295 
Protein GI110801103 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00507503 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGTA ATAAAACTAT TTATACACCA GGGCCTACTA ATTTAAGAGA AAATGTAAGA 
AGAGCAAGAG CTTTAAAAAC TACAAATCCA GATGTTGATG TGGATTTTGT TGAGTTCTAT 
AAGGAAACTT GTGATAGGTT TGGAGAAATT ATAAATACTA AAAATGATTG CTATATACTT 
TCTGGAGAAG GAATTTTAGG GTTAGAAGCT GCCTGTGCAT CCTTAACTGA AAAAGGAGAT 
AAGGTTTTAG TTTTAGATAA TGGGCTATAT GGAAGATGGT TTGATGGCTT TGTAACCATG 
TATGGGGGAG AAGTAACTTA TTTTTCAGGA GATTATACTA AAGAGATTGA TGTTGAAGCT 
TTATCTAAGT TTTTAGAGAA TAATAATGAT TTTAAATATG CTACAGTTGT TCATTGTGAT 
ACTCCAACGG GAGTATTAAA TCCTGTTGAT AAAATTTGTC CATTACTTAA GAGTTATGGA 
ATTTTGACAG TTGTTGATTC TGTCTCTGCT ATGGTAGGAG AAGAATTTAA AGTTGATGAA 
TGGCAAATTG ATATAGCCCT AGGTGGCTCT CAAAAGGCAT TTTCAGCAGA GCCAGGACTT 
ACTATGGTTA GTATAAGTGA TGATGCAAGA AAGGTTATGG AAAATAGAGA AACACCTATT 
GTAGGTTTTT ATTGCAATCT GAATATATGG AAAAATTATT ACAAAGATAA GTGGTTTCCA 
TATACAATGC CAATAAGTGA TATTATTTCT CTTAGGGTTG CTATAGACAA TATTCTAGAA 
GAAGGAAAAG AAAAAGTTAT TGAAAGACAT AGAAAAATTG GAGAAGCAAC TAGAAAGGCA 
GTAAAAGAAT ATGGATTAGA TTTATTCTTA AAAAATGGAT ATTCAAATAC AGTTACAGCT 
GTGGAAATAC CAGAAGAAAT AGGTGCTTTA AACTTAAGAA ATCATCTAAA TAAAAAATAT 
AATGTACTAA TTTCAACATC CTTAGATAAA TATGAAAATA AATTATTAAG AATTGGACAC 
ATGGGGGAAA ATGCAAATAT AGAAGATATA ACCTATGTCC TAAATGCTAT AGACAAGGCT 
TTAAAAGATT TAGGCTTTTC AAGTGAAAAA CAATTAGATA AATTATTTAT AGAAAATATT 
TAA
 
Protein sequence
MNCNKTIYTP GPTNLRENVR RARALKTTNP DVDVDFVEFY KETCDRFGEI INTKNDCYIL 
SGEGILGLEA ACASLTEKGD KVLVLDNGLY GRWFDGFVTM YGGEVTYFSG DYTKEIDVEA 
LSKFLENNND FKYATVVHCD TPTGVLNPVD KICPLLKSYG ILTVVDSVSA MVGEEFKVDE 
WQIDIALGGS QKAFSAEPGL TMVSISDDAR KVMENRETPI VGFYCNLNIW KNYYKDKWFP 
YTMPISDIIS LRVAIDNILE EGKEKVIERH RKIGEATRKA VKEYGLDLFL KNGYSNTVTA 
VEIPEEIGAL NLRNHLNKKY NVLISTSLDK YENKLLRIGH MGENANIEDI TYVLNAIDKA 
LKDLGFSSEK QLDKLFIENI