Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0832 |
Symbol | |
ID | 4203719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 985837 |
End bp | 987465 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 638081716 |
Product | hypothetical protein |
Protein accession | YP_695283 |
Protein GI | 110800051 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0237094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAA AATTAGCTAA TAAAGAAATA AGTCAATGTA ATTATGAAAA AGAGAGCCTT AATAACAGGG AAATAAAAAA TAGTGTAAGA AGTCTACTTT ATAATATAGT TAAGGGAATG ATAAGTGATT TTGGATTAGG TCTTATATTT GTAGTATTTT TAAAACAATG GGTTTACATC TTAATAATAG TTTTAGTACT TTTAGGAATT GCAATTTCAA TTCTTAGTTG GAAGAAAGAG TATATGCTTT TAAAAGGAGA TGAAGCTCAT TATCATAAGG GAGTTTTTTC TAAAAATACT ACAATAATTC CAAAGAAGAG CTTTAAATCT ATGGATATTT CTCAAAATTT AATAGAGAGA ATTTTAGGAT ATAAGATTGT AAAAATTGAA AGTCCCTCTA GAGAGGTTGG AGAAGAAGAT ATTAAAATGA GCTTAAGTGA TGAAGATATA GCTTTGCTTA AGAGTTTTGC CTTTGGAACT AACAAAGAAT TTAATAAAGA GCTTAATAAT GAAGTAAATG AAGGCTTTGA CTTGAAGGAG AATATATTTA GAGAAAGTTT TTTAGATTCT GAAGTTGAAA AGTTAAAAGA GGATTATGAT ATTACTTTAA ATAATAGGGA AAATATAAAT GAGAGTGAAA AGGTACATAT AAATAAGAGT GAAAAAGTAA ATATTAAAGA AAAGAAAATA AGCAATAAAG ATTTAATTTT ATATGGATTT ACAAGCTTTA ATTTATTTAT AGCTATTATT TTTATATTTA ATGCTTGGGG TAAGATTGAA AAATTTATAA ATTCAGAGTA TGTTGATAGT GTTATAAATG GGTATATTGC AAATGAGGCT TCAAAAATAG GGATTATATT TGCAATAGTT GGATTAATCG TAGCTTTAAT TATATTAAAA GCCATAGCTA CAGTATATTA TTTTATAAAA TATTATAATT TTACCCTTTT AAAAGAAGGA GAAAATATAA AAATAAAATA TGGATTCTTT AGCACAAAGG AATTTTCTTT TAAGGAAAAT AGCATAAAGC TTATAAAATT AAAATCAAAT CCTTTAAGAC AACTTTTAAA AAGATATGAA ATAAATGTAG TTATAAAAGG CTATTCTGGA GAAGGAAAAG AGCAGATAAT AATGTATCCC ATAGGAAATG ACAAAGAAGT TCAAAATATA ATAAGAGAAT TTATACCTCA GTGGAGCATA GAAGGTGATG GAGAAGGAAT AAGACATGGA AAGATATTTA TGATTCTAAA ACCAGTTTTA ATAGTATTTA TTATATCTTT AGTAGCCTAT TTAATATTAA AAGTAAAATG GGTATTGCTT ATTAATATAA TTAGTCTTAT AACAATTCCT TCATCAATTT TAAAAGGAAG AAATATAAAT CTTAAGATTA AGGAAAATAA AGTTCGTGCA GTAACAGGAG GATTCTTTAG AACAATACAT ATTCTTAAGG GGAAGGACAT ACAAGCTGTA GGCTTTAATA CAAATCCCAT ACAAGAAAAA AATAATATAG GCAAAATTGT AATTGATTAT TATAGTGAAA ATTCAGAGGA AATAAATTTA CCTTATATGA ATAAGAAGTA TGTAGAAGTA TTATTAAATA GTTCTAAAGG AATTATGCAT AGAAGATAA
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Protein sequence | MNEKLANKEI SQCNYEKESL NNREIKNSVR SLLYNIVKGM ISDFGLGLIF VVFLKQWVYI LIIVLVLLGI AISILSWKKE YMLLKGDEAH YHKGVFSKNT TIIPKKSFKS MDISQNLIER ILGYKIVKIE SPSREVGEED IKMSLSDEDI ALLKSFAFGT NKEFNKELNN EVNEGFDLKE NIFRESFLDS EVEKLKEDYD ITLNNRENIN ESEKVHINKS EKVNIKEKKI SNKDLILYGF TSFNLFIAII FIFNAWGKIE KFINSEYVDS VINGYIANEA SKIGIIFAIV GLIVALIILK AIATVYYFIK YYNFTLLKEG ENIKIKYGFF STKEFSFKEN SIKLIKLKSN PLRQLLKRYE INVVIKGYSG EGKEQIIMYP IGNDKEVQNI IREFIPQWSI EGDGEGIRHG KIFMILKPVL IVFIISLVAY LILKVKWVLL INIISLITIP SSILKGRNIN LKIKENKVRA VTGGFFRTIH ILKGKDIQAV GFNTNPIQEK NNIGKIVIDY YSENSEEINL PYMNKKYVEV LLNSSKGIMH RR
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