Gene CPF_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0832 
Symbol 
ID4203719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp985837 
End bp987465 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content25% 
IMG OID638081716 
Producthypothetical protein 
Protein accessionYP_695283 
Protein GI110800051 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0237094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA AATTAGCTAA TAAAGAAATA AGTCAATGTA ATTATGAAAA AGAGAGCCTT 
AATAACAGGG AAATAAAAAA TAGTGTAAGA AGTCTACTTT ATAATATAGT TAAGGGAATG
ATAAGTGATT TTGGATTAGG TCTTATATTT GTAGTATTTT TAAAACAATG GGTTTACATC
TTAATAATAG TTTTAGTACT TTTAGGAATT GCAATTTCAA TTCTTAGTTG GAAGAAAGAG
TATATGCTTT TAAAAGGAGA TGAAGCTCAT TATCATAAGG GAGTTTTTTC TAAAAATACT
ACAATAATTC CAAAGAAGAG CTTTAAATCT ATGGATATTT CTCAAAATTT AATAGAGAGA
ATTTTAGGAT ATAAGATTGT AAAAATTGAA AGTCCCTCTA GAGAGGTTGG AGAAGAAGAT
ATTAAAATGA GCTTAAGTGA TGAAGATATA GCTTTGCTTA AGAGTTTTGC CTTTGGAACT
AACAAAGAAT TTAATAAAGA GCTTAATAAT GAAGTAAATG AAGGCTTTGA CTTGAAGGAG
AATATATTTA GAGAAAGTTT TTTAGATTCT GAAGTTGAAA AGTTAAAAGA GGATTATGAT
ATTACTTTAA ATAATAGGGA AAATATAAAT GAGAGTGAAA AGGTACATAT AAATAAGAGT
GAAAAAGTAA ATATTAAAGA AAAGAAAATA AGCAATAAAG ATTTAATTTT ATATGGATTT
ACAAGCTTTA ATTTATTTAT AGCTATTATT TTTATATTTA ATGCTTGGGG TAAGATTGAA
AAATTTATAA ATTCAGAGTA TGTTGATAGT GTTATAAATG GGTATATTGC AAATGAGGCT
TCAAAAATAG GGATTATATT TGCAATAGTT GGATTAATCG TAGCTTTAAT TATATTAAAA
GCCATAGCTA CAGTATATTA TTTTATAAAA TATTATAATT TTACCCTTTT AAAAGAAGGA
GAAAATATAA AAATAAAATA TGGATTCTTT AGCACAAAGG AATTTTCTTT TAAGGAAAAT
AGCATAAAGC TTATAAAATT AAAATCAAAT CCTTTAAGAC AACTTTTAAA AAGATATGAA
ATAAATGTAG TTATAAAAGG CTATTCTGGA GAAGGAAAAG AGCAGATAAT AATGTATCCC
ATAGGAAATG ACAAAGAAGT TCAAAATATA ATAAGAGAAT TTATACCTCA GTGGAGCATA
GAAGGTGATG GAGAAGGAAT AAGACATGGA AAGATATTTA TGATTCTAAA ACCAGTTTTA
ATAGTATTTA TTATATCTTT AGTAGCCTAT TTAATATTAA AAGTAAAATG GGTATTGCTT
ATTAATATAA TTAGTCTTAT AACAATTCCT TCATCAATTT TAAAAGGAAG AAATATAAAT
CTTAAGATTA AGGAAAATAA AGTTCGTGCA GTAACAGGAG GATTCTTTAG AACAATACAT
ATTCTTAAGG GGAAGGACAT ACAAGCTGTA GGCTTTAATA CAAATCCCAT ACAAGAAAAA
AATAATATAG GCAAAATTGT AATTGATTAT TATAGTGAAA ATTCAGAGGA AATAAATTTA
CCTTATATGA ATAAGAAGTA TGTAGAAGTA TTATTAAATA GTTCTAAAGG AATTATGCAT
AGAAGATAA
 
Protein sequence
MNEKLANKEI SQCNYEKESL NNREIKNSVR SLLYNIVKGM ISDFGLGLIF VVFLKQWVYI 
LIIVLVLLGI AISILSWKKE YMLLKGDEAH YHKGVFSKNT TIIPKKSFKS MDISQNLIER
ILGYKIVKIE SPSREVGEED IKMSLSDEDI ALLKSFAFGT NKEFNKELNN EVNEGFDLKE
NIFRESFLDS EVEKLKEDYD ITLNNRENIN ESEKVHINKS EKVNIKEKKI SNKDLILYGF
TSFNLFIAII FIFNAWGKIE KFINSEYVDS VINGYIANEA SKIGIIFAIV GLIVALIILK
AIATVYYFIK YYNFTLLKEG ENIKIKYGFF STKEFSFKEN SIKLIKLKSN PLRQLLKRYE
INVVIKGYSG EGKEQIIMYP IGNDKEVQNI IREFIPQWSI EGDGEGIRHG KIFMILKPVL
IVFIISLVAY LILKVKWVLL INIISLITIP SSILKGRNIN LKIKENKVRA VTGGFFRTIH
ILKGKDIQAV GFNTNPIQEK NNIGKIVIDY YSENSEEINL PYMNKKYVEV LLNSSKGIMH
RR