Gene CPF_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0716 
Symbol 
ID4202863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp850890 
End bp851990 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content30% 
IMG OID638081601 
Producthypothetical protein 
Protein accessionYP_695168 
Protein GI110801094 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.073836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACT CTACAGTATT TGGGGGACTA GGTTATATTA CAAGTCTTGT TAAACCATTA 
ATTTTAGGTA TAGCAATAGC CTTTGTATTA AATATACCTA TGAAGTTTTT TGAGAGAAAG
TTATTTAGAA ATTTAGAAAA TAGCAAAAAA TCATGGGTTA GAAGTGCAAA AAGACCTTTA
GCTATTACAG TAACAATAAT AGTTTTAGTT GGAGCCATAA GTGCCATAAT CTTATTTGTT
GTTCCTCAAC TAACTTCAAG TGTAGTTAAA CTTACAGAAA GTATTCCTAC TTATTTAAAA
TCCTTTGAAG TTAATATGAA TAATTATGCT GATTCCACAG TACTTTTAAG TAAAGTTTGG
GATCAGGTTA TGAATACTTG GCAAGAAATA TTAAAAACAG TTACTCATTT ATTTGGTGGA
ATTGCATCTT ACCTTGTTGG CTTAACAGTA GATGTAACAA CAGCTATAAT TGATTTTTGT
TTAGCTTTTG TATTAGCTAT ATACATGCTT TCAAGTAAGG AAAAATTAAT ATGTCAAATA
AAGAAAGTTA TGTATGCATA TCTTAGAGGA GATATAGCAG ATAAAATATT AGAAATTGGA
CAAACTACCA ACAGAGTATT TTCAGGCTTT ATTATTGGCC AATGTACCGA AGCACTGATA
ATAGGTACTT TATGCTTTTT AGGTATGTTA GTATTAAGAA TGCCATATGC TTTCTTAATA
AGTGTTCTTG TTGGTACAAC AAGCTTAATT CCTATTTTAG GAGCATTTAT AGGAACAATA
CCTTCATTTT TCTTAATATT TATAATAAAT CCTATTAAGG CATTTTGGTT TATTGTATTT
ATATTCTGTC TTCAAAGAGT TGAAGGAGAT TTAATTTATC CAAGAGTTGT AGGAGGATCT
GTAGGATTAT CATCCTTATG GGTAATGCTT GCAATTATGA TTGGTGGTAG TGCCTTTGGA
TTTATTGGAA TGTTAGTAGG AGTTCCAACA GCGGCTGTTA TATACTGCGT ATTCGGAAGT
GTTACTAATA AGAGATTAAG CAAAAAAGGT ATAAAAATAG ATGAAGAAGA AATAGAAGAC
AGTGGAAAAA TTCACGTATA A
 
Protein sequence
MKYSTVFGGL GYITSLVKPL ILGIAIAFVL NIPMKFFERK LFRNLENSKK SWVRSAKRPL 
AITVTIIVLV GAISAIILFV VPQLTSSVVK LTESIPTYLK SFEVNMNNYA DSTVLLSKVW
DQVMNTWQEI LKTVTHLFGG IASYLVGLTV DVTTAIIDFC LAFVLAIYML SSKEKLICQI
KKVMYAYLRG DIADKILEIG QTTNRVFSGF IIGQCTEALI IGTLCFLGML VLRMPYAFLI
SVLVGTTSLI PILGAFIGTI PSFFLIFIIN PIKAFWFIVF IFCLQRVEGD LIYPRVVGGS
VGLSSLWVML AIMIGGSAFG FIGMLVGVPT AAVIYCVFGS VTNKRLSKKG IKIDEEEIED
SGKIHV