| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0690 |
|---|
| Symbol | aroC |
|---|
| ID | 4203801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 826544 |
|---|
| End bp | 827617 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638081575 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_695142 |
|---|
| Protein GI | 110800421 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.140082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGAG TTTGGGGTAA TAAAATAAAA TTATCTATAT TTGGAGAATC TCATGGAGAA
GGAATAGGAA TAGTAATAGA TGGAATAGAA CCTGGAATAA AAATAAATAT GGATAACATA
GAAAAAGATA TGGAAAGAAG AGCACCAGGA AGAAATAGTT TATCAACTCA AAGAAAAGAA
GGGGATAAAC CAGAAATTTT AAGTGGAATA TTTAATGGAA TCACCACAGG GGCTCCTATT
TCAATGATAA TAAGAAATAC AGATAAAAGA TCTAGGGATT ATTCAAAAAT AAAAGATGTA
ATGAGACCAG GCCATGCAGA TTTCCCAGGA TACATAAGAT ATAATGGCTT TAATGATTAT
AGAGGGGGAG GACATTTCTC AGGAAGAATA ACAGCGCCCT TAGTTTTTGC TGGAGCCTTA
GCTAAGGAAA TACTTAAGGA AAAAGATATA ACTATTGGTT CTCATATTAA GCAAGTTGGA
AAAGTTAAGG ATTCTTCTTT TGATGCATTA AATTTAAAGA AAGAAGATTT AGAAGAACTT
TTAACTAAAG AACTTCCAGT AATAGATACA AATAAAATAG AAGAAATTAA GGAAGAGATT
ACTTCATATA GAATGGAAGG AGATTCTATT GGAGGAATTG TTGAGTGCGC CATAGTAGGA
TTAGAGGCTG GTATAGGAAA TCCATTCTTT GATTCTTTAG AAAGTACCAT AGCTCATTTA
GCTTTTTCAG TGCCTGCTGT AAAGGGAATT GAATTTGGAG CAGGTTTTGA CTTTGCAAAT
ATGAAAGGTT CAGAAGCAAA TGACGAATAT TTCATAGAAT ATGAAAAAGT TAAGACATAC
TCTAATAATA ATGGAGGAAT AACTGGTGGA ATATCAAATG GAATGCCAGT TATATTCAGA
GTTGTTATAA AACCTACACC ATCTATTTCT AAAGAACAAA GAACTATAAA TATAAAAAAT
ATGACAGAGG AAGTTCTAAG TGTAAATGGT AGACATGATC CTTGTATAGT TCAAAGAGCC
TTAGTTGTTA TAGAAGCCAT TGCAGCTATT TCTATATTAG AGTTAATAAA ATAA
|
|---|
| Protein sequence | MGGVWGNKIK LSIFGESHGE GIGIVIDGIE PGIKINMDNI EKDMERRAPG RNSLSTQRKE
GDKPEILSGI FNGITTGAPI SMIIRNTDKR SRDYSKIKDV MRPGHADFPG YIRYNGFNDY
RGGGHFSGRI TAPLVFAGAL AKEILKEKDI TIGSHIKQVG KVKDSSFDAL NLKKEDLEEL
LTKELPVIDT NKIEEIKEEI TSYRMEGDSI GGIVECAIVG LEAGIGNPFF DSLESTIAHL
AFSVPAVKGI EFGAGFDFAN MKGSEANDEY FIEYEKVKTY SNNNGGITGG ISNGMPVIFR
VVIKPTPSIS KEQRTINIKN MTEEVLSVNG RHDPCIVQRA LVVIEAIAAI SILELIK
|
|---|
| |