| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0628 |
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| Symbol | |
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| ID | 4203078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 755183 |
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| End bp | 756271 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638081513 |
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| Product | spore germination protein |
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| Protein accession | YP_695081 |
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| Protein GI | 110799282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGG GAAAGCTAAC TGCAAGACAT TTTATATTTT TTATCATTGC TGCCATAAGT
ACATCTTTGG TTAACTATAC ATCCTTATTT ATAAAAATAG GTGGAAGAGA TACTTGGATT
TTCACTATAA TCTCTGGAAT TATATTTTTC TTTGTAACTT CCTTTATTTT TAGTGTAATC
TCAAAGATAG AATATTATGA CTTTAAAGAA ACTTGCTATA TAGTTCTTGG TAAACCCTTA
GGAAATATTT ATATATTAAT ATTTTCACTT ACTTTAGTCT TAATGTGCAT AGAATCAGCT
TCTGTAAGCT CATCTTCTAT AAACGTTAAT ATTTTTGCTG AAAGTCCAAT ATGGTATTGT
TTATTGTTTT TCATAATAAC TGTATTTTTA ATAGGTAAAA ATAGATTTAA TAGCATACTT
ATAATATGTA TAGTTTGCGT AAGCATTGTA CTTGCAATTA ATTTATTATT AGCATTATTA
AACATTAGAT ATATAGATTA CACACTTCTT CTTCCTATAT TTAAGGATAG AAGAATTTCA
GAATATATTC TTTGTGCTTT AACTCAATTA GGCTCCTTAT CAAGCTTAGC TATAGTTTTA
CCTATTCTTC CAAGAATAGA TGATAAGAAA AACTTAAAAA AAATCTCAAT AAACACAATA
CTTTTAACAT CTATATTTTG TGCTTTGTGT GTTGTTATAC TAATATCAAC CCTAGGTTCT
TTGAGGTCTG CAAATGTTTT TTATCCTCAA TTTGTTCAAA CTCAAAGAAT TTATTTTGGT
GGTTTTGTAG AGAATGGAAA TGTTTTTGTA ATGATTTCTT CTACTCTTTC TTGGGTTGTA
AAATATTTAA TAACTATTTT TTCATTGTAT ACAATTTGGA AAGATAGGGT AAAATATAAA
CGTAATTTTA TAGCATTAAT TTCAGTAATA GTATATGCCT TTTCTTACTT AGCTGCTAAG
AATGCCTATA CCCTTTTTAT ACTATTAAGA TACTATCAAT ACATACTTCT AATAGTGCTG
TTTATATGCC CTATAATCAT ATATACACTA GCTTATTTTA AGCGTCAGAA ATTTAAATAT
TTGAAGTAA
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| Protein sequence | MSLGKLTARH FIFFIIAAIS TSLVNYTSLF IKIGGRDTWI FTIISGIIFF FVTSFIFSVI
SKIEYYDFKE TCYIVLGKPL GNIYILIFSL TLVLMCIESA SVSSSSINVN IFAESPIWYC
LLFFIITVFL IGKNRFNSIL IICIVCVSIV LAINLLLALL NIRYIDYTLL LPIFKDRRIS
EYILCALTQL GSLSSLAIVL PILPRIDDKK NLKKISINTI LLTSIFCALC VVILISTLGS
LRSANVFYPQ FVQTQRIYFG GFVENGNVFV MISSTLSWVV KYLITIFSLY TIWKDRVKYK
RNFIALISVI VYAFSYLAAK NAYTLFILLR YYQYILLIVL FICPIIIYTL AYFKRQKFKY
LK
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