Gene CPF_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0560 
Symbol 
ID4202658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp668319 
End bp669431 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content27% 
IMG OID638081442 
Productiron-sulfur cluster-binding protein 
Protein accessionYP_695014 
Protein GI110799792 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA AGGAACTAAA GAAAAATTTA GAGGACTGTG TTAATTGTAG ACTTTGCTAC 
AAGGTATGTC CAATGATGAA TACTTTTGGA GAGAGTCCTA AAAATATATT AAGAGATATA
GATAAGAATA AAATAAGTTA TGATGAAATT GCATATTCTT GTATGCTTTG TAATGCATGT
ACTGAAGCAT GTCCAAAAGA TATAAACTTA AAAGAGATGT TTCAAAATTT AAGAATAAAA
TCTTATAGAG AGAATTTAAA AAATACTAGC AAGAAATTTA ATTTAAAGGT TGTTCAAAAC
CATCAAAAAG GTAGTTTTTC TAAGTTTTTA ACATCAAAAA ATAATCATAA GAAAATAAAA
AGAGTGTTTA TTCCAGGTTG TAGCTTAAGT GGATATAACA ATGAAATTAT TTTTAAAATA
AAGGACTACT TAATAGAAAA TTTAGGGAAA GTAGAGATAC TTCTAAAATG TTGTGGAAAA
CCTTCAAAGG ATATTGGAAA CTTAGAATTA TTTGAAAGCA ATTTAAATGA TATAGAGAAT
AATCTAAAAA TCAAGGAAGT TGATGAAATA ATAGTAGCCT GTGAAAATTG TTATAAGACT
TTTGGATCAG CTTTTAAAGA TATTAAAGTA ATAACACTTT GGGAAGTTAT AAATGAATTT
GGAGTGCCAA AGGAACTAAA AAACAAATAT TCAGATTTAA AAGAAGAATT TGCCTTGCAT
GATCCATGTC CTATAAAAAA AGAAGAACAG ATTCATGAAG CTGTTAGAAG CATACTTAAA
GATTTAGGAA TTAAAATAGT AGAATTTGAG AAGAATAGAA GTAAAACTGA ATGCTGTGGT
TGTGGAGGAA TGGTAGGAGT TACAAATAAG GAATTATGGC TAAGTCAAAA AAATAAAAGA
GCTAATTCTA CAGAATGTGA AAATATAGTT TCTTACTGTG AATCCTGCGT AAATACCTTT
AAATCTTCAG ATAAAAATGC ACTACACATA TTAGACTTTA TTTTTAATGA GGATGTTATT
AATGGCAAGG CTAAAAGTCA AAAAAATATA AGCACAATTA ATCAATGGAT AAATAGAATT
AAATTAGCAA ATAAAGTAGG AAAAGAGAGT TAA
 
Protein sequence
MTNKELKKNL EDCVNCRLCY KVCPMMNTFG ESPKNILRDI DKNKISYDEI AYSCMLCNAC 
TEACPKDINL KEMFQNLRIK SYRENLKNTS KKFNLKVVQN HQKGSFSKFL TSKNNHKKIK
RVFIPGCSLS GYNNEIIFKI KDYLIENLGK VEILLKCCGK PSKDIGNLEL FESNLNDIEN
NLKIKEVDEI IVACENCYKT FGSAFKDIKV ITLWEVINEF GVPKELKNKY SDLKEEFALH
DPCPIKKEEQ IHEAVRSILK DLGIKIVEFE KNRSKTECCG CGGMVGVTNK ELWLSQKNKR
ANSTECENIV SYCESCVNTF KSSDKNALHI LDFIFNEDVI NGKAKSQKNI STINQWINRI
KLANKVGKES