Gene CPF_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0545 
Symbol 
ID4201432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp650904 
End bp651377 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content31% 
IMG OID638081427 
Productputative N-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_694999 
Protein GI110800561 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCAGG AATTAGATAT AAAAGAAGTT GATTATAAAT GGGGAAGCGG GCTTAAAAAG 
GGGAATTCAC CTAAAAGATT AATTATTCAT CATTCAGCAA CAGATTCACC AGAAACTCCA 
GAAGATATTC ATAAGTTTCA TTTAGATAAT GGATGGAGTG GAATAGGATA TCATTTTTAT 
ATAAGGGAGG ATGGGACAAT TTATAAAGGT AGAGATGAAA ATGTAATAGG AGCTCATGCA 
AAAAATGCAA ATTATAATAC CTTAGGAATA TGCATTGAAG GAAACTTTGA AAAAGAGGGT 
TTAAAAGAGG CACAAAAAAA TTCACTTGTT AAACTAGGAA CTTATTTAAG CTTAAAATAT 
CCAATAAAAG ATATACTTCC ACACAGGGAA GTTGTGGATA CTTTATGTCC AGGCACACTT 
TTTCCAATGG ATAATATAAA AAGTAGCATT ATTGAGGAAA TAAAGAATAT GTGA
 
Protein sequence
MRQELDIKEV DYKWGSGLKK GNSPKRLIIH HSATDSPETP EDIHKFHLDN GWSGIGYHFY 
IREDGTIYKG RDENVIGAHA KNANYNTLGI CIEGNFEKEG LKEAQKNSLV KLGTYLSLKY 
PIKDILPHRE VVDTLCPGTL FPMDNIKSSI IEEIKNM