| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0529 |
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| Symbol | speE |
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| ID | 4203740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 626690 |
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| End bp | 627541 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638081411 |
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| Product | spermidine synthase |
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| Protein accession | YP_694983 |
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| Protein GI | 110799842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAT GGTACACAGA AGAACATACA GACAAGGTAC GTTTTTCAAT CAAAGTAGAT
GAACAACTTT ATAGTGGAAA GAGCGATTTC CAAAGAATAG ATGTTTTTAA ATCTCAAGAG
TTTGGAACTT TCTTCACATT AGATGGACTT ATGATGGTAA CAGAAAAGGA TGAATTTATT
TATCATGACA TGATAGTTCA TGTTCCAATG GCTACAAATC CTAATATAAA AAATGTACTA
GTTATAGGAG CTGGAGATGG TGGAACTGTA AGAGAACTTA CAAGATATGA AACTATAGAA
AAAATAGACA TGGTTGAAAT TGATAAGTTA GTTGTTGATG TTTGTAGAGA ATATTTACCT
CAAACAGCTA ATAAATTAGA TGATCCTAGA GTAAGTTTAT TCTTTGAAGA TGGATTAAAA
TTTGTACGCT CAGTTGAAAA TAAATATGAC TTAATAATAG TTGATTCAAC AGATCCATTT
GGACCTGGAG AAGGTTTATT CACAAGAGAA TTTTATGGAA ATTGCTTTAA GGCCTTAAAA
GAAGATGGAA TACTTGTAAA TCAACATGAA AGCCCATACT ATGAAGAGTA TGCAAGGGGA
ATGAAGAGAG CTCATAAGAG AATAAAAGAA TGTTTCCCAG TATGTAGAGT TTATCAAGCT
CATATACCAA CTTATCCATC AGGACATTGG CTATTTGGTT TTGCATCAAA AAAATATGAT
CCACTAAATG CTGATATAGA AAAGTGGAAT GATTTAGGAT TAAAAACTAA ATATTATAAC
ACTGAGTTGC ATAAAGGATG TTTTGCATTA CCTAATTATG TTAAGGAGAT GCTAGAGAAT
GTTGATGAAT AG
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| Protein sequence | MELWYTEEHT DKVRFSIKVD EQLYSGKSDF QRIDVFKSQE FGTFFTLDGL MMVTEKDEFI
YHDMIVHVPM ATNPNIKNVL VIGAGDGGTV RELTRYETIE KIDMVEIDKL VVDVCREYLP
QTANKLDDPR VSLFFEDGLK FVRSVENKYD LIIVDSTDPF GPGEGLFTRE FYGNCFKALK
EDGILVNQHE SPYYEEYARG MKRAHKRIKE CFPVCRVYQA HIPTYPSGHW LFGFASKKYD
PLNADIEKWN DLGLKTKYYN TELHKGCFAL PNYVKEMLEN VDE
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