Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0500 |
Symbol | |
ID | 4203902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 596119 |
End bp | 596925 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638081382 |
Product | hypothetical protein |
Protein accession | YP_694954 |
Protein GI | 110799886 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00540555 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATG GAAGAAGAGT TAAAAATCCT AAAAGAAATT CTTCTAGTAG AAGTAAATCT AAGGTTCTAG ATATTTCAAT AATAATTTTA ATAATAGCTT TAGCATTAGT TATAGCTGTT GGAACCATAA GGGATAAGAA GACTTTAGCT AAAAATATGG AAATTTATAG CTCAGATTCA AGTAATAACT CTGAAGATAA TAAAAAGCAA GCGACCACAT CAAATCCTTA TGAAAAAATT AAAAAAGGTG AAGAAGTCAA TATTTTAGTT TTAGGTAATG GTGTAGGAAT TAGTGAAGGA AAAACAGATG AAAGTGGTAA TTGGACAAGT AGTCTTTCTA AATGGTTAGA AGAAACATAT AAATCAAAGG CTAATATAAC AAATTTATCA CAAGATAAAG CTACAGTTAA AGTAGGTTTA GAGGAACTAG AGAAAAATAA AGATAATTTT GATTTAGCTT ACATAATATT TGGTGAAAAT GATCAAAAGG AAATTAAACC TAATGAATTC AAAGAAGATT ATGAAAAAAT AATTAAGAAT TTAAAGGAAA GAAATAAAAA TATCTCTATA GTTCCTATAA TAGAGAATTC TCTTAGAAAG AAAAATGAAT ACACAAATTT AATTGAAGAC ATTGGAAAAG ATAATGATAT AAAGGTTTTA GATATGGCTA CAGTATTTAC AAAGGACCCA GCCCCTTATG CTAAATTAAC AACTAAGGGT GGAATATATC CAAATAATGT AGGATATAGC TTATATTTTT CTAACATAAA ATCTTTAATA GAAGCTAATA TAGCAGCTTT AAATTAA
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Protein sequence | MKNGRRVKNP KRNSSSRSKS KVLDISIIIL IIALALVIAV GTIRDKKTLA KNMEIYSSDS SNNSEDNKKQ ATTSNPYEKI KKGEEVNILV LGNGVGISEG KTDESGNWTS SLSKWLEETY KSKANITNLS QDKATVKVGL EELEKNKDNF DLAYIIFGEN DQKEIKPNEF KEDYEKIIKN LKERNKNISI VPIIENSLRK KNEYTNLIED IGKDNDIKVL DMATVFTKDP APYAKLTTKG GIYPNNVGYS LYFSNIKSLI EANIAALN
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