Gene CPF_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0500 
Symbol 
ID4203902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp596119 
End bp596925 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content26% 
IMG OID638081382 
Producthypothetical protein 
Protein accessionYP_694954 
Protein GI110799886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00540555 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATG GAAGAAGAGT TAAAAATCCT AAAAGAAATT CTTCTAGTAG AAGTAAATCT 
AAGGTTCTAG ATATTTCAAT AATAATTTTA ATAATAGCTT TAGCATTAGT TATAGCTGTT
GGAACCATAA GGGATAAGAA GACTTTAGCT AAAAATATGG AAATTTATAG CTCAGATTCA
AGTAATAACT CTGAAGATAA TAAAAAGCAA GCGACCACAT CAAATCCTTA TGAAAAAATT
AAAAAAGGTG AAGAAGTCAA TATTTTAGTT TTAGGTAATG GTGTAGGAAT TAGTGAAGGA
AAAACAGATG AAAGTGGTAA TTGGACAAGT AGTCTTTCTA AATGGTTAGA AGAAACATAT
AAATCAAAGG CTAATATAAC AAATTTATCA CAAGATAAAG CTACAGTTAA AGTAGGTTTA
GAGGAACTAG AGAAAAATAA AGATAATTTT GATTTAGCTT ACATAATATT TGGTGAAAAT
GATCAAAAGG AAATTAAACC TAATGAATTC AAAGAAGATT ATGAAAAAAT AATTAAGAAT
TTAAAGGAAA GAAATAAAAA TATCTCTATA GTTCCTATAA TAGAGAATTC TCTTAGAAAG
AAAAATGAAT ACACAAATTT AATTGAAGAC ATTGGAAAAG ATAATGATAT AAAGGTTTTA
GATATGGCTA CAGTATTTAC AAAGGACCCA GCCCCTTATG CTAAATTAAC AACTAAGGGT
GGAATATATC CAAATAATGT AGGATATAGC TTATATTTTT CTAACATAAA ATCTTTAATA
GAAGCTAATA TAGCAGCTTT AAATTAA
 
Protein sequence
MKNGRRVKNP KRNSSSRSKS KVLDISIIIL IIALALVIAV GTIRDKKTLA KNMEIYSSDS 
SNNSEDNKKQ ATTSNPYEKI KKGEEVNILV LGNGVGISEG KTDESGNWTS SLSKWLEETY
KSKANITNLS QDKATVKVGL EELEKNKDNF DLAYIIFGEN DQKEIKPNEF KEDYEKIIKN
LKERNKNISI VPIIENSLRK KNEYTNLIED IGKDNDIKVL DMATVFTKDP APYAKLTTKG
GIYPNNVGYS LYFSNIKSLI EANIAALN