Gene CPF_0493 details

Gene Information

• Locus tag: CPF_0493
• Symbol: sipW
• ID: 4203601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 589192
• End bp: 589716
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 638081375
• Product: signal peptidase I
• Protein accession: YP_694947
• Protein GI: 110800919
• TIGRFAM ID: [TIGR02228] signal peptidase I, archaeal type

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG GTATAAAAAT TTTTTATAAT ATTTTATTTT ATAGTTTTTT AACTATACTT 
ATAGCATTTT TACTTCTAGG CTTTTTTGCT AAGAAAAGTG ATTCTGGAAT TAGTATAGGA 
GGATATAGAG TTTATGATAT TTTAACTGGA AGTATGAGTC CTACTATAAA GCCAGGAAAT 
TTGGTAGTTG TAAAGGAAAC ATTACCAAAT GAGGTGAAGA AAAATGATGT TATAACTTTT 
AAAAGTGACA TAACTAATAA TGTTACAACT CATAGAGCTA TAGACATAGT TAATAGTGAT 
GGAAAAACTG AATTTATAAC AAAAGGTGAT GCAAATAATA CTCAAGATCC TGTACCTTTA 
GATGAAAAAT TACTTGTTGG GAAGGTTATT TTTCAAGTGC CACATTTAGG TAGCTTTTTG 
ATTAGCTTAC AAAAAAACAA GTTAATATTT ATAGGTTTAC TTGTAGTTAT TATCTTAATT 
GATTTTATAT TCAATAAATC TTTAGGAGCA AGAAAGAAAA GTTAG 

 

Protein sequence

MKKGIKIFYN ILFYSFLTIL IAFLLLGFFA KKSDSGISIG GYRVYDILTG SMSPTIKPGN 
LVVVKETLPN EVKKNDVITF KSDITNNVTT HRAIDIVNSD GKTEFITKGD ANNTQDPVPL 
DEKLLVGKVI FQVPHLGSFL ISLQKNKLIF IGLLVVIILI DFIFNKSLGA RKKS