Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0459 |
Symbol | |
ID | 4203787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 544990 |
End bp | 545694 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081343 |
Product | DNA-binding response regulator |
Protein accession | YP_694916 |
Protein GI | 110799947 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.025631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGT ATAATGTTTT AGTTGTTGAA GACGAAAAGG AAATAGCAGA GGCTATTGAA ATATATCTAA AAAATCAAGG ATACAATGTA TTTAAAGGAA GTAATGGCTT AGAAGGATTA GAAATAGTTG AAAAAGAAGA GATTCATCTA GCTGTTGTTG ACATAATGAT GCCTAAAATG GATGGAGCAA CAATGGTAAT GAAAATTAGA GAAAGTTATG ACTTTCCTAT AATAATGTTA TCAGCAAAAT CAGAAGATAT GGATAAAATT TTAGGACTTA ATATTGGAGC AGATGATTAT GTAACAAAAC CATTTAATCC ACTAGAGCTT CTTGCAAGAG TTAATTCTCA ATTAAGAAGA TATTCTAAAT ACTTAAACAT GGTAAAAAAG GATGAGAAGA AAACAAATTC TTATGCCATA GGTGGATTAG AAGTTAATAG TGATAGAAAA GAAGTAATAT TAGATGGAGA TGTAGTAAAA GTAACTCCTA TAGAATTTAA AATACTTCAA TTACTTATTA AGAGTCCAGG AAGAGTTTTT TCAGCAGAGG AAATATATGA AAGAGTATGG AATGAAAATG CAGTAAACAC AGACACTGTA ATGGTCCATG TAAGAAATAT AAGAGAAAAA ATAGAGATAG ATCCAAAAAA TCCAAAATAT TTAAAGGTGG TGTGGGGAGT TGGCTATAAA ATCGAAAAGC AATAA
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Protein sequence | MEKYNVLVVE DEKEIAEAIE IYLKNQGYNV FKGSNGLEGL EIVEKEEIHL AVVDIMMPKM DGATMVMKIR ESYDFPIIML SAKSEDMDKI LGLNIGADDY VTKPFNPLEL LARVNSQLRR YSKYLNMVKK DEKKTNSYAI GGLEVNSDRK EVILDGDVVK VTPIEFKILQ LLIKSPGRVF SAEEIYERVW NENAVNTDTV MVHVRNIREK IEIDPKNPKY LKVVWGVGYK IEKQ
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