Gene CPF_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0428 
Symbol 
ID4201273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp514812 
End bp516095 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content31% 
IMG OID638081312 
Producthypothetical protein 
Protein accessionYP_694885 
Protein GI110800851 
COG category[S] Function unknown 
COG ID[COG3538] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.397045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT CAACTAACGA ATTAAAAGAG ATTGTCAGAA AAATTGGTAA AGATTTATCA 
GGTAAAATAG AGGACAAGAA GTTACAAGAA TTATTTTATA ATTGTTTTAT AAATACAATG
GATACAACTG TAGAGGTTTC AGAGGGAGAT GCCTTTGTAA TTACTGGTGA TATTCCTGCA
ATGTGGCTTA GGGATTCCAC TTCTCAAGTA GAGCATTACT TACCATTTGT TAAGGAATAT
CCAGAATTAA AGGCTATTTT TACTGGATTA ATAAATAGAC AAGTAAAATG TATATTCATA
GATCCATATG CAAATGCCTT TAATAAAGAG CCTAATGGAC AAAAATGGGA CAATGATATA
ACTAAGGATA GCCCTTGGGT TTGGGAAAGA AAGTATGAAA TAGATTCACT ATGTTATCCA
GTTAGATTAA TACATAAGTA TTGGAAAGAA TCTGGTGATG AAACTTTCTT TAATGATGAT
ATTAAAAAAG CTTTCAATAT GATAATAGAT TTATGGAGAG TGGAGCAGTA TCATAGAGAA
AAATCAGATT ATAGCTTCCA AAGATTAAAT TGTTCAGTAA CTGACACTTT AAGCCATGAA
GGATTAGGAA CTCCAGTTAC TTACACAGGA ATGACATGGT CAGGATTTAG ACCAAGTGAT
GATGCTTGTG AATATGGATA CTTAATTCCA GCAAACATGT TCGCTGTAGT TGCCTTAAGA
TATATTTCAG AAATTGCAGA GAAGGTTTAT AAGGATGAAG AGCTTAAAGA AAAAGCTGAT
AGTTTAAGAG AAGAAATAGA TAATGCTATA GAAAAGCATG GAAAAGTTTA TAAAGAAGGA
TTTGGAGAAG TTTATGCATA TGAAACTGAT GGTATGGGTA ACTATAACTT CATGGATGAT
GCTAATGTAC CAAGCCTTCT ATCAATTCCT TACTTAGAGT ACAAAGGAAT TGAAGATGAA
GTTTATCAAA ATACTAGAAA ATTTATTTTG AGCAAAAATA ATAGATTCTT CTTTGAAGGA
AAAGCTGCTA AAGGAATTGG AAGTCCACAT ACTCCAGACC AGTATATTTG GCACATAGCT
TTATCAATGC AAGGGTTAAC AACAAATAAT CAAGAGGAAA TAGATCAGTT AATTAAATTA
TTAAAAGAAA CTGATGCAGG GACTGGATAT ATGCATGAAG GTTTCCATGT AGATGACCCT
ACTAAGTTTA CAAGAGATTG GTTTGCATGG TCAAACTCAT TATTCTCACA CTTTATCTAT
GAGAAAGTTA TAAATAAAAA ATAA
 
Protein sequence
MSLSTNELKE IVRKIGKDLS GKIEDKKLQE LFYNCFINTM DTTVEVSEGD AFVITGDIPA 
MWLRDSTSQV EHYLPFVKEY PELKAIFTGL INRQVKCIFI DPYANAFNKE PNGQKWDNDI
TKDSPWVWER KYEIDSLCYP VRLIHKYWKE SGDETFFNDD IKKAFNMIID LWRVEQYHRE
KSDYSFQRLN CSVTDTLSHE GLGTPVTYTG MTWSGFRPSD DACEYGYLIP ANMFAVVALR
YISEIAEKVY KDEELKEKAD SLREEIDNAI EKHGKVYKEG FGEVYAYETD GMGNYNFMDD
ANVPSLLSIP YLEYKGIEDE VYQNTRKFIL SKNNRFFFEG KAAKGIGSPH TPDQYIWHIA
LSMQGLTTNN QEEIDQLIKL LKETDAGTGY MHEGFHVDDP TKFTRDWFAW SNSLFSHFIY
EKVINKK