Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0428 |
Symbol | |
ID | 4201273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 514812 |
End bp | 516095 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638081312 |
Product | hypothetical protein |
Protein accession | YP_694885 |
Protein GI | 110800851 |
COG category | [S] Function unknown |
COG ID | [COG3538] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.397045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAT CAACTAACGA ATTAAAAGAG ATTGTCAGAA AAATTGGTAA AGATTTATCA GGTAAAATAG AGGACAAGAA GTTACAAGAA TTATTTTATA ATTGTTTTAT AAATACAATG GATACAACTG TAGAGGTTTC AGAGGGAGAT GCCTTTGTAA TTACTGGTGA TATTCCTGCA ATGTGGCTTA GGGATTCCAC TTCTCAAGTA GAGCATTACT TACCATTTGT TAAGGAATAT CCAGAATTAA AGGCTATTTT TACTGGATTA ATAAATAGAC AAGTAAAATG TATATTCATA GATCCATATG CAAATGCCTT TAATAAAGAG CCTAATGGAC AAAAATGGGA CAATGATATA ACTAAGGATA GCCCTTGGGT TTGGGAAAGA AAGTATGAAA TAGATTCACT ATGTTATCCA GTTAGATTAA TACATAAGTA TTGGAAAGAA TCTGGTGATG AAACTTTCTT TAATGATGAT ATTAAAAAAG CTTTCAATAT GATAATAGAT TTATGGAGAG TGGAGCAGTA TCATAGAGAA AAATCAGATT ATAGCTTCCA AAGATTAAAT TGTTCAGTAA CTGACACTTT AAGCCATGAA GGATTAGGAA CTCCAGTTAC TTACACAGGA ATGACATGGT CAGGATTTAG ACCAAGTGAT GATGCTTGTG AATATGGATA CTTAATTCCA GCAAACATGT TCGCTGTAGT TGCCTTAAGA TATATTTCAG AAATTGCAGA GAAGGTTTAT AAGGATGAAG AGCTTAAAGA AAAAGCTGAT AGTTTAAGAG AAGAAATAGA TAATGCTATA GAAAAGCATG GAAAAGTTTA TAAAGAAGGA TTTGGAGAAG TTTATGCATA TGAAACTGAT GGTATGGGTA ACTATAACTT CATGGATGAT GCTAATGTAC CAAGCCTTCT ATCAATTCCT TACTTAGAGT ACAAAGGAAT TGAAGATGAA GTTTATCAAA ATACTAGAAA ATTTATTTTG AGCAAAAATA ATAGATTCTT CTTTGAAGGA AAAGCTGCTA AAGGAATTGG AAGTCCACAT ACTCCAGACC AGTATATTTG GCACATAGCT TTATCAATGC AAGGGTTAAC AACAAATAAT CAAGAGGAAA TAGATCAGTT AATTAAATTA TTAAAAGAAA CTGATGCAGG GACTGGATAT ATGCATGAAG GTTTCCATGT AGATGACCCT ACTAAGTTTA CAAGAGATTG GTTTGCATGG TCAAACTCAT TATTCTCACA CTTTATCTAT GAGAAAGTTA TAAATAAAAA ATAA
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Protein sequence | MSLSTNELKE IVRKIGKDLS GKIEDKKLQE LFYNCFINTM DTTVEVSEGD AFVITGDIPA MWLRDSTSQV EHYLPFVKEY PELKAIFTGL INRQVKCIFI DPYANAFNKE PNGQKWDNDI TKDSPWVWER KYEIDSLCYP VRLIHKYWKE SGDETFFNDD IKKAFNMIID LWRVEQYHRE KSDYSFQRLN CSVTDTLSHE GLGTPVTYTG MTWSGFRPSD DACEYGYLIP ANMFAVVALR YISEIAEKVY KDEELKEKAD SLREEIDNAI EKHGKVYKEG FGEVYAYETD GMGNYNFMDD ANVPSLLSIP YLEYKGIEDE VYQNTRKFIL SKNNRFFFEG KAAKGIGSPH TPDQYIWHIA LSMQGLTTNN QEEIDQLIKL LKETDAGTGY MHEGFHVDDP TKFTRDWFAW SNSLFSHFIY EKVINKK
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