| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0426 |
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| Symbol | |
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| ID | 4201211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 510845 |
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| End bp | 513457 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638081310 |
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| Product | helicase, UvrD/REP/exonuclease family protein |
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| Protein accession | YP_694883 |
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| Protein GI | 110799207 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATT TAAATGAAGA GCAACAAAAG GTTGTAAATG AACAAAAAAA TAATATTATT
TTGCTTGCCT CTGCTGGAAC AGGAAAAACT AATACCTTAG CAGAGAGAGT CACTTCCATA
ATAAAAAATG GAAATTCAAA GCCTTCAGAA ATTTTATGTA TCACTTTTAC CAATAAGGCA
TGTAAAGAGA TGAGTGATAG GGTAATGAAA ATAGTTGGGG GAGAGGCTAA GGATATAACC
ATAAGAACTT TTCATAGTTT TTGCTTTGAT GTAGTTAGAA CTTATGCAAA GAGAAATACA
GATATTTTTT CAGATTTCAC AATATTTGAT GAAGATGATT GTAGAGAAGT TATAAGTAAA
TTAAGTTATT ACTATGCTAC AAGCAATTTA ATGGCTACTA ATATGCAAAT TCAAAAGGTT
ATTGATTTTA TAAAGGTTGA AAGAGCAAGA ATAGAAACTT TAGAGGATAG AGTTTTAGAT
GAATATAAAA CTGTAATTGA TGAAATTTTT AAATTTAGAG AAGAAAAAAT AAATCAAGTT
TGTACTAACA AAGGAAACTT AAATTTAAAT CTTAAAAATT ATATTAAATT TCATGGCCAT
GAATTAGTAA CACTATATGA TTCTAAGCTT AGAGAGGACC ATGCTTTAGA CTTTAATGAT
TTAATAATAC TTACTAAGGA ATTATTTAAG GATGAAAAAG TTGTTAGGGC TCTTAAAAAT
AAATTTAAGT ATATAAATAT AGATGAGGTT CAGGATACAA GCATTATAGA GTATTCAATA
ATTGAGAAGA TTTTTGAAGG AAACAATGTT CTTATATGTG GAGATTTCTT TCAAACCATA
TATAGTTGGC GTGGATCTGA TCCAGAAATA ATTTTTAATA AATTTAAAGA AAAATATAAT
CCTGTAGAAA TTGTTTTTTC TAAGAATTAT AGGGCAACCA AAAATTTAAA TAAAGCTTCC
TTAGAATTTT TGAACAATGC TTTTTCTAGT AAAGTTTCTA CTATGTATAA AGATGGTATT
TTAGCAGAAT CAAAAGAAGA TGGTGAGAAA ATATTATTAA AGGAAACTAG AGGATTAAGA
GAAGAGGCTA GGTTTATCTT TGATTATGTA AATAAGCTAT GTGAAAAGGG TGAAGATTTA
AAAAGAGTAT GTGTTCTTAC AAGGGATAAT AACTATAATA TAGGACTTAG TGAAGAGCTT
TATCAAATTG GTGGATATGA GGGATCAGAT TTTGAGTTTA TACTTGTAGA TCAATTTAAG
TTTTTTAGGA GACAAGAAGT TAAAGATATA TTAGCCTTTT TAAAACTAAT AGCTAATAGA
TATGATTCAC TAAGTTTAAA GAGAATAGTC AATAGACTTC CAACAGGAAT TGGTATGAGA
ACCTTAGAGA CTATAGAATC TTATAAGTAC AAAGAGGTTG GCATAAGATT AGCAGATTAT
ATAGATCCTC TTGTATTAAA ATATGGAGAA AAATTTTCAC TACTAATAAA TGAGTTTGAA
AAAGAGAATA TAATAGTTTT TGATGTGGAA AGTACAGGGG TTGATGTTAC AGAGGATGAG
ATAATTCAAA TAGCAGCCAT AAAATTAAAT AAAAATGGAG AAGTAGTAGA TAAGTTTGAA
AAATTTCTAA AGAATAAGAA ACCAGTTAAG GATTCCTATT ATGTTCATGG TTTTTCAGAT
GAAATGCTTC AAAGAATTGG AGAAGACAAA GAAAAAGTTT TAAAGGAATT TGTGGAGTAT
TCTAAGGATT CTATAATAGT AGGTCACAAT GTTCAATATG ATATAAATAT CCTGTGTAGT
GAGCTTGAAA GAAATAATTT AGGAAAGCCT AAGTTTAAAA CTTTTTATGA TACTTTAGAT
ATATATAGAA GATTTTATCC TGGAAATATA AATTATAAGT TAGAAAATCT AAGTAAGGTT
TATGATACTA AACATAAGCC TAGCCATGAT GCTATGGATG ATATTATTGC TACAGGTGAG
CTTCTAGTTA GGGCAATAAA TAAAAAGATA ATTCCAACTT CAATGGAAAG AATGGCCTTA
ATGTCAAAAC ATCTAAAAGC ATTTACGGCT ATTAGTAAAA AGTTAAATGA GCTTTTTCAA
ATAGCAGAAA GTAAAAGACC TTACGAATTA GTTGCCTGTG TAATGAATGG CTTTAATATT
AAGAGTATGT ATGCTGGAGA TGAAAACAAA GAAAAGTTAA ATAGATTAAG AGATTTATAT
GCTTTATTTA GAGATTTAGA TGATAAGAGT AAAGGGAATA GAGATGCCTT GTTAGATATT
ATAAGAATAA CAGGTCTTTC TAATGGAGAG CTAGAATCTT TAATAATAAA TAGAACTAAA
AAGCCTAGAA TACCAATAAT AACTGTGCAT CAAGCAAAGG GCTTAGAGTT TGATACTGTA
TTTTTAGCAG GTATTCAAAA TAATACATTT CCTTCTTATA TGTCTATTAA AGAGGGAAAT
CTATCAGAAG AAAAAAGGGT ATTTTATGTG GCAATAACTC GTGCAAAGAA AAGGTTAGTT
ATAACATATA ATTCTCAAGG AAAATATGGA CATAGAAATG AAATAAGTCA GTTTATAAAT
TATATTCCAA AGGAGTTCTT TAAAATTATA TAA
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| Protein sequence | MINLNEEQQK VVNEQKNNII LLASAGTGKT NTLAERVTSI IKNGNSKPSE ILCITFTNKA
CKEMSDRVMK IVGGEAKDIT IRTFHSFCFD VVRTYAKRNT DIFSDFTIFD EDDCREVISK
LSYYYATSNL MATNMQIQKV IDFIKVERAR IETLEDRVLD EYKTVIDEIF KFREEKINQV
CTNKGNLNLN LKNYIKFHGH ELVTLYDSKL REDHALDFND LIILTKELFK DEKVVRALKN
KFKYINIDEV QDTSIIEYSI IEKIFEGNNV LICGDFFQTI YSWRGSDPEI IFNKFKEKYN
PVEIVFSKNY RATKNLNKAS LEFLNNAFSS KVSTMYKDGI LAESKEDGEK ILLKETRGLR
EEARFIFDYV NKLCEKGEDL KRVCVLTRDN NYNIGLSEEL YQIGGYEGSD FEFILVDQFK
FFRRQEVKDI LAFLKLIANR YDSLSLKRIV NRLPTGIGMR TLETIESYKY KEVGIRLADY
IDPLVLKYGE KFSLLINEFE KENIIVFDVE STGVDVTEDE IIQIAAIKLN KNGEVVDKFE
KFLKNKKPVK DSYYVHGFSD EMLQRIGEDK EKVLKEFVEY SKDSIIVGHN VQYDINILCS
ELERNNLGKP KFKTFYDTLD IYRRFYPGNI NYKLENLSKV YDTKHKPSHD AMDDIIATGE
LLVRAINKKI IPTSMERMAL MSKHLKAFTA ISKKLNELFQ IAESKRPYEL VACVMNGFNI
KSMYAGDENK EKLNRLRDLY ALFRDLDDKS KGNRDALLDI IRITGLSNGE LESLIINRTK
KPRIPIITVH QAKGLEFDTV FLAGIQNNTF PSYMSIKEGN LSEEKRVFYV AITRAKKRLV
ITYNSQGKYG HRNEISQFIN YIPKEFFKII
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